G2237088


Basic Information

Item Value
gene id G2237088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 42267281 ~ 42267575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2557487
CCCCTAGATAACACGGCGCGTAAATGTCTAAACTTTAAAGGAGGTGGATGTGCTATATAGCAGCAGCGGAGTTAATTCGCGCTCTGTCAGTTTCATTCCACTGaagttttaaaaaaaaggcaCTCAGGATTAATTTCACTTGGACAAAGAAAACCTAAAAACGGGAAACGTGCAGTTCAGTGTGACATTTACTTGAAGTGTTTATTATGCGGTCCCAAGAGAGCATAGAACACGCAGAAGTGGCCCACCTAATTTAAAAACGCTTATACAAAATGTAGGCTATAGCTGTTGTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2557487 True 295 lncRNA 0.41 1 42267281 42267575

Neighbor

gene id symbol gene type direction distance location
LOC110521005 LOC106560551 coding upstream 213612 42012575 ~ 42053669 (+)
LOC110520957 LOC106583970 coding upstream 788860 41477485 ~ 41478421 (+)
LOC110521832 LOC106583970 coding upstream 799761 41458881 ~ 41467520 (+)
LOC110521828 LOC106584006 coding upstream 1109280 41101017 ~ 41158001 (+)
pik3r3b LOC106584012 coding upstream 1798702 40143590 ~ 40468579 (+)
LOC110521838 LOC106583933 coding downstream 58684 42326259 ~ 42506540 (+)
LOC110521840 LOC106583968 coding downstream 280753 42548328 ~ 42554269 (+)
LOC110521842 LOC105011996 coding downstream 388581 42656156 ~ 42664378 (+)
LOC110521843 pde6d coding downstream 418238 42685813 ~ 42692514 (+)
LOC110521844 phb2 coding downstream 426290 42693865 ~ 42705266 (+)
G2237073 NA non-coding upstream 18691 42248385 ~ 42248590 (+)
G2237067 NA non-coding upstream 25268 42241756 ~ 42242013 (+)
G2237064 NA non-coding upstream 28021 42238968 ~ 42239260 (+)
G2237063 NA non-coding upstream 28415 42238656 ~ 42238866 (+)
G2237062 NA non-coding upstream 28700 42238279 ~ 42238581 (+)
G2237096 NA non-coding downstream 13358 42280933 ~ 42281378 (+)
G2237104 NA non-coding downstream 18015 42285590 ~ 42285791 (+)
G2237210 NA non-coding downstream 243478 42511053 ~ 42511282 (+)
G2237214 NA non-coding downstream 247609 42515184 ~ 42515388 (+)
G2237215 NA non-coding downstream 248102 42515677 ~ 42515894 (+)
G2236045 NA other upstream 881288 41385660 ~ 41385993 (+)
LOC110521817 LOC106584021 other upstream 2459231 39800038 ~ 39812756 (+)
LOC110521001 LOC106584026 other upstream 3090588 39117484 ~ 39202411 (+)
G2237341 NA other downstream 462277 42729852 ~ 42730451 (+)
G2238623 adgrl4 other downstream 1173278 43440853 ~ 43465829 (+)
G2238671 LOC100136747 other downstream 1341006 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 2132310 44399885 ~ 44427686 (+)

Expression


Co-expression Network