G2237799


Basic Information

Item Value
gene id G2237799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 42722841 ~ 42723305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2558257
ccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgataatccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcacttttaacggacctctgagactatcacagtgcaggtgcatttatactgagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2558257 True 465 lncRNA 0.44 1 42722841 42723305

Neighbor

gene id symbol gene type direction distance location
LOC110521841 LOC106583966 coding downstream 106117 42556881 ~ 42616724 (-)
LOC110521839 LOC106583969 coding downstream 171983 42526928 ~ 42550858 (-)
LOC110521837 NA coding downstream 410410 42294701 ~ 42312431 (-)
LOC110521836 LOC106583981 coding downstream 453983 42256238 ~ 42268858 (-)
LOC110521834 nek7 coding downstream 491979 42100595 ~ 42230862 (-)
LOC110521848 LOC106583960 coding upstream 340951 43064256 ~ 43082034 (-)
LOC118945796 NA coding upstream 409968 43133273 ~ 43134588 (-)
LOC110521850 LOC106583957 coding upstream 417413 43140718 ~ 43144980 (-)
LOC110521851 LOC106583956 coding upstream 429090 43152395 ~ 43175237 (-)
LOC110521854 LOC106583953 coding upstream 470337 43193642 ~ 43275036 (-)
G2237786 NA non-coding downstream 16665 42705719 ~ 42706176 (-)
G2237673 NA non-coding downstream 210303 42512332 ~ 42512538 (-)
G2237670 NA non-coding downstream 213701 42508889 ~ 42509140 (-)
G2237501 NA non-coding downstream 443272 42279350 ~ 42279569 (-)
G2237817 NA non-coding upstream 24398 42747703 ~ 42747966 (-)
G2238226 LOC106583964 non-coding upstream 30963 42754268 ~ 42783111 (-)
G2238258 NA non-coding upstream 95189 42818494 ~ 42818732 (-)
G2238261 NA non-coding upstream 99091 42822396 ~ 42822706 (-)
G2238263 NA non-coding upstream 103162 42826467 ~ 42826775 (-)
G2237502 NA other downstream 441479 42280756 ~ 42281362 (-)
G2234837 NA other downstream 2436559 40285654 ~ 40286282 (-)
G2234611 NA other downstream 2728927 39956915 ~ 39993914 (-)
LOC110521806 NA other downstream 3866150 38838904 ~ 38856693 (-)
G2232820 NA other downstream 3954938 38765422 ~ 38767903 (-)
G2237814 NA other upstream 19589 42742894 ~ 42743592 (-)
G2239635 LOC106583937 other upstream 1558831 44282136 ~ 44283368 (-)
G2240022 aldoa other upstream 2006928 44721963 ~ 44733310 (-)
LOC110521015 LOC106583894 other upstream 2246417 44950503 ~ 45003269 (-)
LOC110521929 LOC106583891 other upstream 3151966 45875271 ~ 45885821 (-)

Expression


Co-expression Network