G2237342


Basic Information

Item Value
gene id G2237342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 42730872 ~ 42731091 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2557777
tctcactgttgccgactgttatagacccccctcagctcccagctgtgccctggacaccatatgtgaattgattgcccaccATCtgtcttcagagtttgttcttttaggtgacctaaactgggatatgcttaacaccccggcagtcctacaatctaatctagatgccctcaatctcacacaaatgatcaaggaacccaccaggtacaaccctgaatccgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2557777 True 220 lncRNA 0.48 1 42730872 42731091

Neighbor

gene id symbol gene type direction distance location
LOC110521844 phb2 coding upstream 25606 42693865 ~ 42705266 (+)
LOC110521843 pde6d coding upstream 38358 42685813 ~ 42692514 (+)
LOC110521842 LOC105011996 coding upstream 66494 42656156 ~ 42664378 (+)
LOC110521840 LOC106583968 coding upstream 176603 42548328 ~ 42554269 (+)
LOC110521838 LOC106583933 coding upstream 224332 42326259 ~ 42506540 (+)
LOC110521845 LOC106583964 coding downstream 47312 42778403 ~ 42783111 (+)
LOC110521846 LOC106583961 coding downstream 98687 42829778 ~ 43017029 (+)
LOC110521006 NA coding downstream 367355 43098446 ~ 43104156 (+)
LOC110521849 LOC106583958 coding downstream 373255 43104346 ~ 43127082 (+)
LOC110521852 LOC106560595 coding downstream 452242 43183333 ~ 43189752 (+)
G2237323 NA non-coding upstream 37740 42692907 ~ 42693132 (+)
G2237199 LOC106583966 non-coding upstream 169282 42556895 ~ 42561590 (+)
G2237215 NA non-coding upstream 214978 42515677 ~ 42515894 (+)
G2237214 NA non-coding upstream 215484 42515184 ~ 42515388 (+)
G2237346 NA non-coding downstream 5955 42737046 ~ 42737314 (+)
G2237348 NA non-coding downstream 6621 42737712 ~ 42737996 (+)
G2237350 NA non-coding downstream 13889 42744980 ~ 42745193 (+)
G2237821 NA non-coding downstream 21431 42752522 ~ 42752796 (+)
G2237857 NA non-coding downstream 86577 42817668 ~ 42818011 (+)
G2237341 NA other upstream 421 42729852 ~ 42730451 (+)
G2236045 NA other upstream 1344879 41385660 ~ 41385993 (+)
LOC110521828 LOC106584006 other upstream 1609782 41101017 ~ 41158001 (+)
pik3r3b LOC106584012 other upstream 2586090 40143590 ~ 40468579 (+)
G2238623 adgrl4 other downstream 709762 43440853 ~ 43465829 (+)
G2238671 LOC100136747 other downstream 877490 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 1668794 44399885 ~ 44427686 (+)
LOC110521895 LOC103040367 other downstream 1825103 44555495 ~ 44563618 (+)
G2239510 NA other downstream 1843765 44574856 ~ 44575278 (+)

Expression


Co-expression Network