G2238634


Basic Information

Item Value
gene id G2238634
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 43459123 ~ 43518012 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2559188
ataacacatatggaatcatgtggtaaccaaaaaagttgtcacgaacctcgccgaggatggtgcctcttcctgttcgggcggtgctcggcggtcgtcgtcgccggcctattagctgccatcgattccctttccgtttgttttgggttattggttaattgggtacacctgttttgtattaggatttgtttgtagggtatttaggggcactaggcccgctgggtatttgtgcgggcttgtttttgttactctgtgttttgatggtgtgattttttcttgtatttattctccggactgtttagtcctgttgttttGGACTGGCAACTTAttttacgccctgtgtgttggcgtgactgtttttgttgtgctggggaataaatctgaagaaacgactgaaccctgctctctgcgcctgattccaaccaccacacctagtagatcgtaacagaagcccgcacctatgaaatggagtcagcaggagcagcgaccactcctctccccac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2559188 True 500 lncRNA 0.48 2 43459123 43518012

Neighbor

gene id symbol gene type direction distance location
zranb2 zranb2 coding upstream 45010 43401184 ~ 43414113 (+)
LOC110521855 rpl36 coding upstream 141677 43303838 ~ 43317446 (+)
LOC110521852 LOC106560595 coding upstream 269371 43183333 ~ 43189752 (+)
LOC110521849 LOC106583958 coding upstream 332041 43104346 ~ 43127082 (+)
LOC110521006 NA coding upstream 354967 43098446 ~ 43104156 (+)
LOC110513710 LOC100136747 coding downstream 18212 43536224 ~ 43546571 (+)
LOC110519394 LOC100136747 coding downstream 33638 43551650 ~ 43561525 (+)
LOC110515334 LOC100136747 coding downstream 48578 43566590 ~ 43576447 (+)
LOC110521861 LOC100136747 coding downstream 63514 43581526 ~ 43591268 (+)
LOC110521008 LOC100136747 coding downstream 78299 43596311 ~ 43608691 (+)
G2238147 NA non-coding upstream 96273 43306410 ~ 43362850 (+)
G2238067 NA non-coding upstream 262403 43193643 ~ 43196720 (+)
G2238021 LOC106583956 non-coding upstream 304228 43152399 ~ 43154895 (+)
G2238055 NA non-coding upstream 308722 43150201 ~ 43150401 (+)
G2238038 NA non-coding upstream 361502 43097399 ~ 43097621 (+)
G2238687 NA non-coding downstream 59289 43577301 ~ 43592677 (+)
G2238748 NA non-coding downstream 197255 43715267 ~ 43743741 (+)
G2239203 NA non-coding downstream 486903 44004915 ~ 44005214 (+)
G2239209 NA non-coding downstream 493760 44011772 ~ 44012006 (+)
G2239235 NA non-coding downstream 509365 44027377 ~ 44027711 (+)
G2237341 NA other upstream 728672 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 905937 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2073130 41385660 ~ 41385993 (+)
LOC110521828 LOC106584006 other upstream 2338033 41101017 ~ 41158001 (+)
pik3r3b LOC106584012 other upstream 3314341 40143590 ~ 40468579 (+)
G2238671 LOC100136747 other downstream 90569 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 881873 44399885 ~ 44427686 (+)
LOC110521895 LOC103040367 other downstream 1038182 44555495 ~ 44563618 (+)
G2239510 NA other downstream 1056844 44574856 ~ 44575278 (+)
G2239933 NA other downstream 1335689 44853478 ~ 44860893 (+)

Expression


Co-expression Network