G2238687



Basic Information


Item Value
gene id G2238687
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 43577301 ~ 43592677 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2559259
atttaacacagtaaattcatcaggcttaagccatgtttcagtcaggccaatcacatcaagattatgatcagtgattagttcattgattataattgcctttgaagtaagggatctaacattaagtagccctattttgagatgtgaggtatcatgatctctttcaataatgacaggaatggaggtggtctttatcctagtgagattgctaaggcgaacaccgccatgtttagttttgcccaacctaggtcgaggcacagacacggtctcaatggtgatagctgagctgactacactgactgggctagtggcagactccactatgctggcaggctggctaacagcctgctgcctggcctgcaccctatttcattgtagagctagaggagttagagccctgtctatgttggcagataagatgagagcacccctccagctaggat

Function


NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2559259 True 440 lncRNA 0.45 2 43577301 43592677

Neighbor


gene id symbol gene type direction distance location
LOC110515334 LOC100136747 coding upstream 854 43566590 ~ 43576447 (+)
LOC110519394 LOC100136747 coding upstream 15776 43551650 ~ 43561525 (+)
LOC110513710 LOC100136747 coding upstream 30730 43536224 ~ 43546571 (+)
zranb2 zranb2 coding upstream 163188 43401184 ~ 43414113 (+)
LOC110521855 rpl36 coding upstream 259855 43303838 ~ 43317446 (+)
LOC110521008 LOC100136747 coding downstream 3634 43596311 ~ 43608691 (+)
LOC110521009 LOC100136747 coding downstream 21754 43614431 ~ 43623301 (+)
LOC110521871 LOC106583949 coding downstream 245843 43838520 ~ 43845724 (+)
LOC118945797 NA coding downstream 312829 43905506 ~ 43910872 (+)
LOC110521011 LOC106583946 coding downstream 469376 44062053 ~ 44100935 (+)
G2238634 NA non-coding upstream 59289 43459123 ~ 43518012 (+)
G2238664 NA non-coding upstream 80591 43496463 ~ 43496710 (+)
G2238147 NA non-coding upstream 214451 43306410 ~ 43362850 (+)
G2238067 NA non-coding upstream 380581 43193643 ~ 43196720 (+)
G2238021 LOC106583956 non-coding upstream 422406 43152399 ~ 43154895 (+)
G2238748 NA non-coding downstream 122590 43715267 ~ 43743741 (+)
G2239203 NA non-coding downstream 412238 44004915 ~ 44005214 (+)
G2239209 NA non-coding downstream 419095 44011772 ~ 44012006 (+)
G2239235 NA non-coding downstream 434700 44027377 ~ 44027711 (+)
G2239247 NA non-coding downstream 440160 44032837 ~ 44033097 (+)
G2238623 adgrl4 other upstream 111472 43440853 ~ 43465829 (+)
G2237341 NA other upstream 846850 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 1024115 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2191308 41385660 ~ 41385993 (+)
LOC110521828 LOC106584006 other upstream 2456211 41101017 ~ 41158001 (+)
G2238671 LOC100136747 other downstream 15904 43608581 ~ 43623303 (+)
G2239435 LOC106583900 other downstream 807208 44399885 ~ 44427686 (+)
LOC110521895 LOC103040367 other downstream 963517 44555495 ~ 44563618 (+)
G2239510 NA other downstream 982179 44574856 ~ 44575278 (+)
G2239933 NA other downstream 1261024 44853478 ~ 44860893 (+)

Expression



Co-expression Network