G2238748


Basic Information

Item Value
gene id G2238748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 43715267 ~ 43743741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2559343
gctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgttcagctgtgttgcttttacgccaaacataacattttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaatgacactttttatggatatctttaagaaatggctttcttcttgcctctcttccataaaggccagatttgtgcaatatacaactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcaattcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttttccttgtatgagctgaaagtttagaggg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2559343 True 561 lncRNA 0.44 2 43715267 43743741

Neighbor

gene id symbol gene type direction distance location
LOC110521009 LOC100136747 coding upstream 91966 43614431 ~ 43623301 (+)
LOC110521008 LOC100136747 coding upstream 106576 43596311 ~ 43608691 (+)
LOC110521861 LOC100136747 coding upstream 123999 43581526 ~ 43591268 (+)
LOC110515334 LOC100136747 coding upstream 138820 43566590 ~ 43576447 (+)
LOC110519394 LOC100136747 coding upstream 153742 43551650 ~ 43561525 (+)
LOC110521871 LOC106583949 coding downstream 94779 43838520 ~ 43845724 (+)
LOC118945797 NA coding downstream 161765 43905506 ~ 43910872 (+)
LOC110521011 LOC106583946 coding downstream 318312 44062053 ~ 44100935 (+)
LOC110521874 LOC106583945 coding downstream 370026 44113767 ~ 44124283 (+)
LOC110521876 LOC106583944 coding downstream 380666 44124407 ~ 44145448 (+)
G2238687 NA non-coding upstream 122590 43577301 ~ 43592677 (+)
G2238634 NA non-coding upstream 197255 43459123 ~ 43518012 (+)
G2238664 NA non-coding upstream 218557 43496463 ~ 43496710 (+)
G2238147 NA non-coding upstream 352417 43306410 ~ 43362850 (+)
G2238067 NA non-coding upstream 518547 43193643 ~ 43196720 (+)
G2239203 NA non-coding downstream 261174 44004915 ~ 44005214 (+)
G2239209 NA non-coding downstream 268031 44011772 ~ 44012006 (+)
G2239235 NA non-coding downstream 283636 44027377 ~ 44027711 (+)
G2239247 NA non-coding downstream 289096 44032837 ~ 44033097 (+)
G2239274 NA non-coding downstream 311521 44055262 ~ 44055700 (+)
G2238671 LOC100136747 other upstream 91964 43608581 ~ 43623303 (+)
G2238623 adgrl4 other upstream 249438 43440853 ~ 43465829 (+)
G2237341 NA other upstream 984816 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 1162081 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2329274 41385660 ~ 41385993 (+)
G2239435 LOC106583900 other downstream 656144 44399885 ~ 44427686 (+)
LOC110521895 LOC103040367 other downstream 812453 44555495 ~ 44563618 (+)
G2239510 NA other downstream 831115 44574856 ~ 44575278 (+)
G2239933 NA other downstream 1109960 44853478 ~ 44860893 (+)
G2240165 NA other downstream 1221029 44964770 ~ 44965537 (+)

Expression


Co-expression Network