Gene
RNA
| Item | Value |
|---|---|
| gene id | G2239235 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 44027377 ~ 44027711 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2559891 | True | 335 | lncRNA | 0.43 | 1 | 44027377 | 44027711 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945797 | NA | coding | upstream | 116505 | 43905506 ~ 43910872 (+) |
| LOC110521871 | LOC106583949 | coding | upstream | 181653 | 43838520 ~ 43845724 (+) |
| LOC110521009 | LOC100136747 | coding | upstream | 404076 | 43614431 ~ 43623301 (+) |
| LOC110521008 | LOC100136747 | coding | upstream | 418686 | 43596311 ~ 43608691 (+) |
| LOC110521861 | LOC100136747 | coding | upstream | 436109 | 43581526 ~ 43591268 (+) |
| LOC110521011 | LOC106583946 | coding | downstream | 34342 | 44062053 ~ 44100935 (+) |
| LOC110521874 | LOC106583945 | coding | downstream | 86056 | 44113767 ~ 44124283 (+) |
| LOC110521876 | LOC106583944 | coding | downstream | 96696 | 44124407 ~ 44145448 (+) |
| LOC110521877 | LOC106583943 | coding | downstream | 118334 | 44146045 ~ 44162689 (+) |
| LOC110521878 | mvp | coding | downstream | 142219 | 44169930 ~ 44196336 (+) |
| G2239209 | NA | non-coding | upstream | 15371 | 44011772 ~ 44012006 (+) |
| G2239203 | NA | non-coding | upstream | 22163 | 44004915 ~ 44005214 (+) |
| G2238748 | NA | non-coding | upstream | 283636 | 43715267 ~ 43743741 (+) |
| G2238687 | NA | non-coding | upstream | 434700 | 43577301 ~ 43592677 (+) |
| G2238634 | NA | non-coding | upstream | 509365 | 43459123 ~ 43518012 (+) |
| G2239247 | NA | non-coding | downstream | 5126 | 44032837 ~ 44033097 (+) |
| G2239274 | NA | non-coding | downstream | 27551 | 44055262 ~ 44055700 (+) |
| G2239277 | NA | non-coding | downstream | 30685 | 44058396 ~ 44058669 (+) |
| G2239280 | NA | non-coding | downstream | 31879 | 44059590 ~ 44059815 (+) |
| G2238671 | LOC100136747 | other | upstream | 404074 | 43608581 ~ 43623303 (+) |
| G2238623 | adgrl4 | other | upstream | 561548 | 43440853 ~ 43465829 (+) |
| G2237341 | NA | other | upstream | 1296926 | 42729852 ~ 42730451 (+) |
| LOC110521840 | LOC106583968 | other | upstream | 1474191 | 42548328 ~ 42554269 (+) |
| G2236045 | NA | other | upstream | 2641384 | 41385660 ~ 41385993 (+) |
| G2239435 | LOC106583900 | other | downstream | 372174 | 44399885 ~ 44427686 (+) |
| LOC110521895 | LOC103040367 | other | downstream | 528483 | 44555495 ~ 44563618 (+) |
| G2239510 | NA | other | downstream | 547145 | 44574856 ~ 44575278 (+) |
| G2239933 | NA | other | downstream | 825990 | 44853478 ~ 44860893 (+) |
| G2240165 | NA | other | downstream | 937059 | 44964770 ~ 44965537 (+) |
