G2239247


Basic Information

Item Value
gene id G2239247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 44032837 ~ 44033097 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2559903
AAAAAAACTaatcttgttgttttggaaaaggagggaagcgccctctaccaaattatggctcagtgaattggcaaacactgtacacttagaaagaattagatatattctgaacaataaattatcaacatttgatcaaatctggcagcctttcctctcctacttggacgagtcggcgctgtgaatttgtacttattaacgcactctcaattgtaatattttaatctacctttgggcagcatgtgctggccctgccacccgagc

Function

NR:

description
Retrovirus-related Pol polyprotein LINE-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2559903 True 261 lncRNA 0.40 1 44032837 44033097

Neighbor

gene id symbol gene type direction distance location
LOC118945797 NA coding upstream 121965 43905506 ~ 43910872 (+)
LOC110521871 LOC106583949 coding upstream 187113 43838520 ~ 43845724 (+)
LOC110521009 LOC100136747 coding upstream 409536 43614431 ~ 43623301 (+)
LOC110521008 LOC100136747 coding upstream 424146 43596311 ~ 43608691 (+)
LOC110521861 LOC100136747 coding upstream 441569 43581526 ~ 43591268 (+)
LOC110521011 LOC106583946 coding downstream 28956 44062053 ~ 44100935 (+)
LOC110521874 LOC106583945 coding downstream 80670 44113767 ~ 44124283 (+)
LOC110521876 LOC106583944 coding downstream 91310 44124407 ~ 44145448 (+)
LOC110521877 LOC106583943 coding downstream 112948 44146045 ~ 44162689 (+)
LOC110521878 mvp coding downstream 136833 44169930 ~ 44196336 (+)
G2239235 NA non-coding upstream 5126 44027377 ~ 44027711 (+)
G2239209 NA non-coding upstream 20831 44011772 ~ 44012006 (+)
G2239203 NA non-coding upstream 27623 44004915 ~ 44005214 (+)
G2238748 NA non-coding upstream 289096 43715267 ~ 43743741 (+)
G2238687 NA non-coding upstream 440160 43577301 ~ 43592677 (+)
G2239274 NA non-coding downstream 22165 44055262 ~ 44055700 (+)
G2239277 NA non-coding downstream 25299 44058396 ~ 44058669 (+)
G2239280 NA non-coding downstream 26493 44059590 ~ 44059815 (+)
G2239312 NA non-coding downstream 74012 44107109 ~ 44107394 (+)
G2238671 LOC100136747 other upstream 409534 43608581 ~ 43623303 (+)
G2238623 adgrl4 other upstream 567008 43440853 ~ 43465829 (+)
G2237341 NA other upstream 1302386 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 1479651 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2646844 41385660 ~ 41385993 (+)
G2239435 LOC106583900 other downstream 366788 44399885 ~ 44427686 (+)
LOC110521895 LOC103040367 other downstream 523097 44555495 ~ 44563618 (+)
G2239510 NA other downstream 541759 44574856 ~ 44575278 (+)
G2239933 NA other downstream 820604 44853478 ~ 44860893 (+)
G2240165 NA other downstream 931673 44964770 ~ 44965537 (+)

Expression


Co-expression Network