G2239312


Basic Information

Item Value
gene id G2239312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 44107109 ~ 44107394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2559972
gtaacttattttgtatataatgttgctgctaccgaaaagagcttctggacatcagaacagcgattactcaccttgaattggacaaataatttttctttaacgagtcggacgaGAGGGATTTATTCCAGACACctgaacaggccctcatccccgtcattcgcaggagaaagagacagcgaTTTAGAGGAAGGAtatcggggtgccttgtgaggatcaggcgacgagtggctaatctgcctttgccatccatactattagccaacgtacaatcgctggaaaataaatt

Function

NR:

description
PREDICTED: retinoblastoma-like protein 2 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2559972 True 286 lncRNA 0.44 1 44107109 44107394

Neighbor

gene id symbol gene type direction distance location
LOC110521011 LOC106583946 coding upstream 6174 44062053 ~ 44100935 (+)
LOC118945797 NA coding upstream 196237 43905506 ~ 43910872 (+)
LOC110521871 LOC106583949 coding upstream 261385 43838520 ~ 43845724 (+)
LOC110521009 LOC100136747 coding upstream 483808 43614431 ~ 43623301 (+)
LOC110521008 LOC100136747 coding upstream 498418 43596311 ~ 43608691 (+)
LOC110521874 LOC106583945 coding downstream 6373 44113767 ~ 44124283 (+)
LOC110521876 LOC106583944 coding downstream 17013 44124407 ~ 44145448 (+)
LOC110521877 LOC106583943 coding downstream 38651 44146045 ~ 44162689 (+)
LOC110521878 mvp coding downstream 62536 44169930 ~ 44196336 (+)
LOC110521879 LOC106600749 coding downstream 89983 44197377 ~ 44206470 (+)
G2239280 NA non-coding upstream 47294 44059590 ~ 44059815 (+)
G2239277 NA non-coding upstream 48440 44058396 ~ 44058669 (+)
G2239274 NA non-coding upstream 51409 44055262 ~ 44055700 (+)
G2239247 NA non-coding upstream 74012 44032837 ~ 44033097 (+)
G2239314 NA non-coding downstream 2012 44109406 ~ 44109822 (+)
G2239346 NA non-coding downstream 106082 44213476 ~ 44213805 (+)
G2239347 NA non-coding downstream 107478 44214872 ~ 44215154 (+)
G2239350 NA non-coding downstream 112072 44219466 ~ 44219671 (+)
G2239363 NA non-coding downstream 134279 44241673 ~ 44242010 (+)
G2238671 LOC100136747 other upstream 483806 43608581 ~ 43623303 (+)
G2238623 adgrl4 other upstream 641280 43440853 ~ 43465829 (+)
G2237341 NA other upstream 1376658 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 1553923 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2721116 41385660 ~ 41385993 (+)
G2239435 LOC106583900 other downstream 292491 44399885 ~ 44427686 (+)
LOC110521895 LOC103040367 other downstream 448800 44555495 ~ 44563618 (+)
G2239510 NA other downstream 467462 44574856 ~ 44575278 (+)
G2239933 NA other downstream 746307 44853478 ~ 44860893 (+)
G2240165 NA other downstream 857376 44964770 ~ 44965537 (+)

Expression


Co-expression Network