G2239635 (LOC106583937)


Basic Information

Item Value
gene id G2239635
gene name LOC106583937
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 44282136 ~ 44283368 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2560366
TCCATACCCAAAACGCCTACTATTTAGAATGCAAGTATTCTGACACGGCCACACAGAGCGAGAGATGGGTGTTGACTTACGTAGGTGGCAGTGGGGCTGGCCTGAGCGAAGACGATGGCGAGGTAGAGGAAGGGCGCTGAGAGCAGGAGTCCTAGAGCACACACCAGGGGGTCAGCCTTTGGGGTCCTCAACCTCAGCCTCCTACTGACCTCTGCACCACTGGCCACACCCAGGATCCCCGACACAACTGTGATGATGCCAAAGTACAGGCTGTCGGAGGTGTCGCAGGGCCCCTTAATGCAGGGGGGCCTTTCTCCGGTGAAGACAGCAGCTCTGAAGAGGAAGGCCGGGGCCCAGAGTGCCAAGGAGCCAGTCACAAAGGCCACTGCTGTGAAGCCAAACGTAGACAACACAAAGCTGGGGTTTCTGCAAAGGGCCTTCATGTCACCCAGCCAGCTGGTCCTTTGGAGGGTGTGCTCCGGTCGGGCCTCGATAGCACCCCTCTTCGGCTCTTTCACCACAAACAGAAGCAACACCACCGCTACCAGTCCTAACGCAGGAG

Function

NR:

description
protein spinster homolog 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2560366 True 562 TUCP 0.58 3 44282136 44283368

Neighbor

gene id symbol gene type direction distance location
LOC110521883 LOC106583939 coding downstream 26212 44253438 ~ 44255924 (-)
LOC110521873 LOC106583948 coding downstream 286228 43846943 ~ 43995908 (-)
LOC100272218 LOC106583950 coding downstream 473812 43687471 ~ 43808324 (-)
LOC110521869 LOC106583934 coding downstream 624574 43650217 ~ 43657562 (-)
LOC110521860 NA coding downstream 772509 43499546 ~ 43509627 (-)
LOC110521888 LOC106583900 coding upstream 33255 44316623 ~ 44403475 (-)
LOC110521890 NA coding upstream 126198 44408843 ~ 44411438 (-)
LOC110521013 LOC106583902 coding upstream 148947 44432315 ~ 44466862 (-)
LOC110521891 LOC106583903 coding upstream 198490 44481858 ~ 44496943 (-)
LOC118945902 NA coding upstream 267904 44551272 ~ 44551325 (-)
G2239697 NA non-coding downstream 38999 44242834 ~ 44243137 (-)
G2239696 NA non-coding downstream 40025 44241853 ~ 44242111 (-)
G2239686 NA non-coding downstream 60987 44220707 ~ 44221149 (-)
G2239682 NA non-coding downstream 65056 44216875 ~ 44217080 (-)
G2239636 NA non-coding upstream 31674 44315042 ~ 44315207 (-)
G2239727 NA non-coding upstream 84561 44367929 ~ 44372878 (-)
G2239728 NA non-coding upstream 89602 44372970 ~ 44374166 (-)
G2237814 NA other downstream 1538544 42742894 ~ 42743592 (-)
G2237502 NA other downstream 2000774 42280756 ~ 42281362 (-)
G2234837 NA other downstream 3995854 40285654 ~ 40286282 (-)
G2234611 NA other downstream 4288222 39956915 ~ 39993914 (-)
LOC110521806 NA other downstream 5425445 38838904 ~ 38856693 (-)
G2240022 aldoa other upstream 446865 44721963 ~ 44733310 (-)
LOC110521015 LOC106583894 other upstream 686354 44950503 ~ 45003269 (-)
LOC110521929 LOC106583891 other upstream 1591903 45875271 ~ 45885821 (-)
G2241718 NA other upstream 2008542 46291910 ~ 46301730 (-)

Expression


Co-expression Network