G2239414


Basic Information

Item Value
gene id G2239414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 44373045 ~ 44374669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2560086
TCAcgtatccctctctctcgcgtGCTCCGCCAAGTCTCCTTTTCTCTCGCGCCCCGTCACGTCTCCCTCTCGCACTCCGACACGTCCATCTCTCTCGCTtccccacgtctccctctctctcgcgctcgGACACGTCTCCCTCTATCTCGATTCGCcaagtttccctctctctctctcgctccccgtcacgtctccctctctctcgcgccCGGACACGTCTCCCTCTATCTCGCTTCGCcaagtttccctctctctctcgcgccccttcacttcaccctctctctcgcaCGCCGACacgtccatctctctcgctcagccaagtctccttttctctctagctctgccacgtctccctctctctctagcgctacgccacgtctccctctctctctagctctgccacgtctctctctctagctctgccacgtctctctctctagctctgccacgtctctctctctagctctgccacgtctccctctctctctcgcgctccgccacgtctccctctgtctctcgcaCTCCGAcacgtccatctctctctctcgctccgcctGGTGTCCTTTTCTCTCGCGCTCTGCCAagtctccttctctttctctcgcttccccacgtctccctctatttctctcacgTATCCCTCTCGCACTCCGCCACGTCTCTCTCTCACGTGCTCTACCACGTCTCcctcgtctccctctctctctcacacaatccaccacgtctccctctctcacacaatccgccacgtctccctctctcgaTCTCCatccacgtctccctctctctctcgcacaccgCCAcgtctcccaatctctctcttgcttctccacgtctccctctctctctcgcacaccgCCAcgtctcccaatctctctctcgctccgccaAGTCTCCTTTTCTCTCGAGCCCCgacacgtctccctctctctctctcgaacacgtctccctctctggcgctcgaacacgtctccctctctcgcgCCCCttcacgtctccctctctctcgcactcAGACACGTCCATCTCTCGCGCTCCACCAAGTCTCCTTTTCTCTCACGCCCGACgcgtctccctttctctctctagctctgccacgtctccctctctagctctgacacgtcaccctctctctctctcgcactccgacacgtccatctctctcgctccgcCAAGTCTCCTTTTCTCTCGCGCTCCGccaagtctccctctctctctcacacttggcgtctctctctctctctctctcacacccgccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2560086 True 1259 lncRNA 0.60 2 44373045 44374669

Neighbor

gene id symbol gene type direction distance location
lat NA coding upstream 79609 44290436 ~ 44293436 (+)
LOC110521885 LOC106583937 coding upstream 83770 44272549 ~ 44289275 (+)
LOC110521884 sgf29 coding upstream 103839 44261145 ~ 44269206 (+)
LOC110521882 LOC106584009 coding upstream 124692 44246842 ~ 44248418 (+)
LOC110521881 LOC106583940 coding upstream 138112 44231559 ~ 44234933 (+)
LOC110521889 rabep2 coding downstream 45853 44420522 ~ 44431709 (+)
LOC110521892 mk03 coding downstream 141422 44516091 ~ 44531384 (+)
LOC110521893 LOC106583904 coding downstream 157750 44532419 ~ 44553025 (+)
LOC110521895 LOC103040367 coding downstream 180826 44555495 ~ 44563618 (+)
LOC110521896 LOC106583906 coding downstream 220352 44595021 ~ 44614287 (+)
G2239409 NA non-coding upstream 22825 44348905 ~ 44350220 (+)
G2239354 NA non-coding upstream 100985 44271469 ~ 44272060 (+)
G2239372 NA non-coding upstream 117088 44253441 ~ 44255957 (+)
G2239367 NA non-coding upstream 128213 44244599 ~ 44244832 (+)
G2239416 NA non-coding downstream 2339 44377008 ~ 44378792 (+)
G2239472 NA non-coding downstream 98540 44473209 ~ 44473482 (+)
G2239473 NA non-coding downstream 98880 44473549 ~ 44473876 (+)
G2239530 NA non-coding downstream 180195 44554864 ~ 44555217 (+)
G2238671 LOC100136747 other upstream 749742 43608581 ~ 43623303 (+)
G2238623 adgrl4 other upstream 907216 43440853 ~ 43465829 (+)
G2237341 NA other upstream 1642594 42729852 ~ 42730451 (+)
LOC110521840 LOC106583968 other upstream 1819859 42548328 ~ 42554269 (+)
G2236045 NA other upstream 2987052 41385660 ~ 41385993 (+)
G2239435 LOC106583900 other downstream 25216 44399885 ~ 44427686 (+)
G2239510 NA other downstream 200187 44574856 ~ 44575278 (+)
G2239933 NA other downstream 479032 44853478 ~ 44860893 (+)
G2240165 NA other downstream 590101 44964770 ~ 44965537 (+)

Expression


Co-expression Network