G2239543


Basic Information

Item Value
gene id G2239543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 44580679 ~ 44580914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2560249
GATGAatcatttttctttaatgagtcggacgagagggatttactccagacgaGGCCATCATCCCCGTCATTCACAGGAGAAAAAGACGGCGATATTGAGGAAGaagatcggggtgccttgtaaggatccggcgacgagtggctaatctgcctttgccatcggtACTATTGGCCAACATACAGTCGCTGGATAACAAAGTGGACGAACTACAAGCATGTAtaccctaccaacgggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2560249 True 236 lncRNA 0.49 1 44580679 44580914

Neighbor

gene id symbol gene type direction distance location
LOC110521895 LOC103040367 coding upstream 17521 44555495 ~ 44563618 (+)
LOC110521893 LOC106583904 coding upstream 27654 44532419 ~ 44553025 (+)
LOC110521892 mk03 coding upstream 49295 44516091 ~ 44531384 (+)
LOC110521889 rabep2 coding upstream 148970 44420522 ~ 44431709 (+)
lat NA coding upstream 287243 44290436 ~ 44293436 (+)
LOC110521896 LOC106583906 coding downstream 14107 44595021 ~ 44614287 (+)
LOC110521898 LOC106600727 coding downstream 55108 44636022 ~ 44653677 (+)
LOC118945806 NA coding downstream 76585 44657499 ~ 44660097 (+)
LOC110521899 rnf25 coding downstream 89803 44670717 ~ 44672641 (+)
LOC110521902 LOC106583907 coding downstream 102816 44683730 ~ 44700582 (+)
G2239537 NA non-coding upstream 11016 44569427 ~ 44569663 (+)
G2239533 NA non-coding upstream 15193 44565104 ~ 44565486 (+)
G2239530 NA non-coding upstream 25462 44554864 ~ 44555217 (+)
G2239473 NA non-coding upstream 106803 44473549 ~ 44473876 (+)
G2239472 NA non-coding upstream 107197 44473209 ~ 44473482 (+)
G2239509 NA non-coding downstream 8136 44589050 ~ 44589725 (+)
G2239548 NA non-coding downstream 8923 44589837 ~ 44590072 (+)
G2239549 NA non-coding downstream 9816 44590730 ~ 44591031 (+)
G2239865 rnf25 non-coding downstream 77971 44658885 ~ 44672576 (+)
G2239510 NA other upstream 5401 44574856 ~ 44575278 (+)
G2239435 LOC106583900 other upstream 152993 44399885 ~ 44427686 (+)
G2238671 LOC100136747 other upstream 957376 43608581 ~ 43623303 (+)
G2238623 adgrl4 other upstream 1114850 43440853 ~ 43465829 (+)
G2239933 NA other downstream 272787 44853478 ~ 44860893 (+)
G2240165 NA other downstream 383856 44964770 ~ 44965537 (+)
G2240221 LOC106583920 other downstream 477103 45058017 ~ 45125710 (+)
LOC110521020 LOC107658484 other downstream 1580290 46161172 ~ 46190655 (+)

Expression


Co-expression Network