G2239971


Basic Information

Item Value
gene id G2239971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 44868051 ~ 44868309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2560747
TATACTATGTTACATACACACGCAAACCACATTCCTAAAAAAACATCCATTTTGTTTATGGGGATCTATCCAAATATGTGGAGGTATGGCCTGTAGAACACTGATAAATATCCAACAAGGACGAAGGTCGTAGGAGTAGAGCAGCTCCTAATTGGCTACACTGTAGGCTGAGCCACACCGCCAGGAAGAAGAGGAAAAAGAAGATGTCTTTCATCTGCCAATCAGGAGGGGAACAGAATATTAAATTCGGGATTATCAC

Function

NR:

description
PREDICTED: transient receptor potential cation channel subfamily M member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2560747 True 259 lncRNA 0.42 1 44868051 44868309

Neighbor

gene id symbol gene type direction distance location
LOC110521014 rcn3 coding upstream 19697 44838387 ~ 44848354 (+)
LOC110521908 LOC106583914 coding upstream 64526 44784210 ~ 44803525 (+)
LOC110521907 LOC106583912 coding upstream 84968 44779950 ~ 44783083 (+)
LOC110521906 NA coding upstream 89174 44776552 ~ 44778877 (+)
LOC110521905 ppp4c coding upstream 99734 44738189 ~ 44768317 (+)
LOC110521916 prmt1 coding downstream 263451 45131760 ~ 45139316 (+)
LOC110521917 LOC106583923 coding downstream 282057 45150366 ~ 45170704 (+)
LOC118945915 NA coding downstream 289221 45157530 ~ 45157608 (+)
LOC110521918 LOC106583924 coding downstream 437205 45305514 ~ 45307830 (+)
LOC110521919 NA coding downstream 489543 45357852 ~ 45365288 (+)
G2239970 NA non-coding upstream 181 44867664 ~ 44867870 (+)
G2239969 NA non-coding upstream 3549 44864159 ~ 44864502 (+)
G2239933 NA non-coding upstream 7158 44853478 ~ 44860893 (+)
G2239966 NA non-coding upstream 17921 44849881 ~ 44850130 (+)
G2239956 LOC106583913 non-coding upstream 32851 44830885 ~ 44835200 (+)
G2239972 NA non-coding downstream 565 44868874 ~ 44869196 (+)
G2239937 NA non-coding downstream 1034 44869343 ~ 44871658 (+)
G2240149 NA non-coding downstream 73234 44941543 ~ 44941796 (+)
G2240156 NA non-coding downstream 78363 44946672 ~ 44946902 (+)
G2240159 NA non-coding downstream 82214 44950523 ~ 44951894 (+)
G2239510 NA other upstream 292773 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 304433 44555495 ~ 44563618 (+)
G2239435 LOC106583900 other upstream 440365 44399885 ~ 44427686 (+)
G2238671 LOC100136747 other upstream 1244748 43608581 ~ 43623303 (+)
G2240165 NA other downstream 96461 44964770 ~ 44965537 (+)
G2240221 LOC106583920 other downstream 189708 45058017 ~ 45125710 (+)
LOC110521020 LOC107658484 other downstream 1292895 46161172 ~ 46190655 (+)

Expression


Co-expression Network