G2240268


Basic Information

Item Value
gene id G2240268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 45142528 ~ 45142747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2561106
CACGAATtgaatgttgtgtgtgtgcatcGAAATAACCACAAGTCATTCAGAGTATCACAACAGTTCAACTACTATTCCACAAAATTACTTGTGGAGAAGCAATTATTGGTATCATGATTGTCTATGaattattttcatttttatttccATTCGCTATAATGGGGGATCCTGTTTTTTgctaacaatgcctgcagtacctTGGTCGGTTATGAACTTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2561106 True 220 lncRNA 0.37 1 45142528 45142747

Neighbor

gene id symbol gene type direction distance location
LOC110521916 prmt1 coding upstream 3212 45131760 ~ 45139316 (+)
LOC110521014 rcn3 coding upstream 294174 44838387 ~ 44848354 (+)
LOC110521908 LOC106583914 coding upstream 339003 44784210 ~ 44803525 (+)
LOC110521907 LOC106583912 coding upstream 359445 44779950 ~ 44783083 (+)
LOC110521906 NA coding upstream 363651 44776552 ~ 44778877 (+)
LOC110521917 LOC106583923 coding downstream 7619 45150366 ~ 45170704 (+)
LOC118945915 NA coding downstream 14783 45157530 ~ 45157608 (+)
LOC110521918 LOC106583924 coding downstream 162767 45305514 ~ 45307830 (+)
LOC110521919 NA coding downstream 215105 45357852 ~ 45365288 (+)
LOC110521920 LOC106583926 coding downstream 225949 45368696 ~ 45382880 (+)
G2240221 LOC106583920 non-coding upstream 82225 45058017 ~ 45125710 (+)
G2240196 NA non-coding upstream 117965 45022323 ~ 45024563 (+)
G2240159 NA non-coding upstream 190634 44950523 ~ 44951894 (+)
G2240156 NA non-coding upstream 195626 44946672 ~ 44946902 (+)
G2240149 NA non-coding upstream 200732 44941543 ~ 44941796 (+)
G2240269 NA non-coding downstream 313 45143060 ~ 45143267 (+)
G2240270 NA non-coding downstream 1893 45144640 ~ 45144902 (+)
G2240272 NA non-coding downstream 4279 45147026 ~ 45147543 (+)
G2240273 NA non-coding downstream 5698 45148445 ~ 45148652 (+)
G2240456 NA non-coding downstream 87538 45230285 ~ 45321010 (+)
G2240165 NA other upstream 176991 44964770 ~ 44965537 (+)
G2239933 NA other upstream 282192 44853478 ~ 44860893 (+)
G2239510 NA other upstream 567250 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 578910 44555495 ~ 44563618 (+)
LOC110521020 LOC107658484 other downstream 1018457 46161172 ~ 46190655 (+)

Expression


Co-expression Network