G2240273


Basic Information

Item Value
gene id G2240273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 45148445 ~ 45148652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2561111
taacctgactccgccaatctccccgtgtgccctccaaaatattttggggggctgcctctcgtgcctgctaCATTGCAGTGACTCCTGGTATCGTTGTCGTTCCTCCCTTGTCCCCTGCCATAACATGCTCCCATGTCCAAGATGTCCTCCACTCGCTCTTCTTCCGTGCTCTTCTTCCGGGCCCAGGATCCatgctcctcctggccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2561111 True 208 lncRNA 0.57 1 45148445 45148652

Neighbor

gene id symbol gene type direction distance location
LOC110521916 prmt1 coding upstream 9129 45131760 ~ 45139316 (+)
LOC110521014 rcn3 coding upstream 300091 44838387 ~ 44848354 (+)
LOC110521908 LOC106583914 coding upstream 344920 44784210 ~ 44803525 (+)
LOC110521907 LOC106583912 coding upstream 365362 44779950 ~ 44783083 (+)
LOC110521906 NA coding upstream 369568 44776552 ~ 44778877 (+)
LOC110521917 LOC106583923 coding downstream 1714 45150366 ~ 45170704 (+)
LOC118945915 NA coding downstream 8878 45157530 ~ 45157608 (+)
LOC110521918 LOC106583924 coding downstream 156862 45305514 ~ 45307830 (+)
LOC110521919 NA coding downstream 209200 45357852 ~ 45365288 (+)
LOC110521920 LOC106583926 coding downstream 220044 45368696 ~ 45382880 (+)
G2240272 NA non-coding upstream 902 45147026 ~ 45147543 (+)
G2240270 NA non-coding upstream 3543 45144640 ~ 45144902 (+)
G2240269 NA non-coding upstream 5178 45143060 ~ 45143267 (+)
G2240268 NA non-coding upstream 5698 45142528 ~ 45142747 (+)
G2240221 LOC106583920 non-coding upstream 88142 45058017 ~ 45125710 (+)
G2240456 NA non-coding downstream 81633 45230285 ~ 45321010 (+)
G2240592 NA non-coding downstream 183893 45332545 ~ 45332769 (+)
G2240599 NA non-coding downstream 187416 45336068 ~ 45336436 (+)
G2240605 NA non-coding downstream 189320 45337972 ~ 45338187 (+)
G2240607 NA non-coding downstream 189699 45338351 ~ 45338599 (+)
G2240165 NA other upstream 182908 44964770 ~ 44965537 (+)
G2239933 NA other upstream 288109 44853478 ~ 44860893 (+)
G2239510 NA other upstream 573167 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 584827 44555495 ~ 44563618 (+)
LOC110521020 LOC107658484 other downstream 1012552 46161172 ~ 46190655 (+)

Expression


Co-expression Network