G2240367


Basic Information

Item Value
gene id G2240367
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 45161391 ~ 45170698 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2561237
TTTAAAAACAAAACTTTATTTCAGGAGAATCAGAACAATTCCATTGAGGGTTCCCCAGTCTTGCTTTACAGAATAAAAATGAGCAATATTTGCCAACTCTTGGACATGCACTTTGCAACACATTTCCTTACTCCCACAAACATTTTCAATAACCAGGTTTCCAGCCAACCTTTATGTGAGTAAAGGACATCGGATACAAAAAAGTAATGACAGGCCATAGACATTTTTGGGGTAAATTATCCAAAtgtcaaaacaaaaaacacactaGACAAAGTAGAATATTGTAAGTAAAATTAATTAGAAAAACAGTGGAAATgcttttatgcgcaaatattgatacaataaccatcatattgaagtaaacttggagtcatgtGGTCCTCCCACAACAACTAGTCGGGAAAGCATGCTGTTCATTaaactacagatgaaataagtgaacttcacagggtggtgaaagcaCAAGGTAATTAGCTTGATGCTACTAACCAATAAATATCTAGGGTTTTCGTCTGGTGACATGATAATCTATGCTtggttgttaaaaaaaaaaaataatattgtcCATATGATGTCATGTAGGCAAtatgtgcgctctagccaacagcacaCAGATCGTGCTATTGGTTAGAGCACACATGCCAATACCAAAGTGAGCACACTCACTATAACGCAATCAGtggagttgaaaatgtgatgaaaCCCATTTAACTAGTTTTTCATTTTTgatacatgggaatttaaccacaAAATGCTTTTAATTTGCACTACATCACACAGCCTTTTATTTGCACCAAGTCAATAGGATGGAAACATGCGCATGTTTTTAGGCAGATTCAAGAATAtgtgcatgaaaatctgtcgccaattgaatggaaacctagctgtTGCTGTACATTTTCTTCAGGGTAGACATGTGTCCAGACAGTTGAGTAAGATGTTCTCAGGTTTGTACTTAAAGTAAAAGGAACATGAAGGCTCCAAAATTATGAAGGAAAAAAAAGAATCTAACAAACATGGACTCATACAAACCACATGGGGGGAAATGTTAAATAAAACCAAAACGTAACCCCAATAAAAATAAAACCCTGGTTGAATAAAGAAAAATACACCAACTGAGATTAAGAAAAAGAGAAACAAATATTTCACCCTAACTACGCCATCTCTGCCTCGCTCGTGAAGGGATTGTAATCAGACAATTAAGTACTTGACAGAGCAGAATGTGAGATTAAAGTTCCGGTTGGGGGAGAGCGTGAATGTTAAGGGACAGTGAGCACCGTTCTCAGTTTGGTACCGAGGGACGGGTTTGAAATAATTGTGGTGTGGACCTCGTCCTTGGGGTTCAAATACAGAAGAAACAAAACCCTACTTACCCTATAAAACGGACAGTTTGTTTCTTATGCCTACACAGCGCCGTTGTGGTTTCTAACAGGGCAGCAGCTCATTACAATATCCTTCACACTAACAGGGAAGGAGTATGTGAGTTTGTGTTGGatacatgtattttttaaagGAAATTAGTAAAGATGGCAAAGCCCCTCTTAATACTCTTCTGCCTGGGTCTCCACCTTGTAGCCGTTCTCATTGGAAACGTAACCCTCCCCCGATTGCACCGACTCTTGGTCCATCATCAACCCATCCTGGCTGTTCTCTTCTGGCTGGGGCGGCGCGTCGCCCTCATCCCCGTTACCCACGTCGTTCTGCTCGGCCGAGGGGAGCAGGAGAGAGCCATGCCGGTCCTCCCTGCGCTCCCCGCCACcccgctccctgtctctcttatgctccctgtctttctccctgtcGCCCCTGTGCCTCTCACGGTCCCTCTCACGGTCCTTGTCCCTGTGGCTGCGCCTCCGGTCACGGTCccgctccctgtctctgtcccgctCCCTCCCGCCGCgctcctctcccacttcctcacCCACACTAGGCTCTTcaggcatcctctctcctccctcccctatcATACCATCTCCTAGCACCAAGCCCTCATCACCTTCACCACCCTTGCCCCTCTCCCGGTCTCGCTTGCGCTCTCGACTGcggctcctcctcttcctttcacctttgtctctgctcctctccctgctATGACTGTCTCCCCCTggccctcctccccccctctccctctctcggtctctccttcTGCCACCCCCTACACTCTCCTCTGCGGGCCCAGCCTGGACCAGACCCCTGTCACCCCTCTCCCTGGAGCGGGAGCTGCGCCTGCGTCTTTCCCGGGACCGGGACCGTCGTCTCTCGCCACCGCGCTCTTTCTCCACACCCCGTTCGCGCTCACGGCTGCGCTCTCTGCGTTCCCCTCTGGGCTCAGGTCCACGTTCGCGCTCACGTTCCCCTCCAATTGGGGGATGGTCATCATAACGTGAGGTGTCGTCTCTTCCAGAGTGCTTGATGTTGACGTCAGCcccacctctccttgtcccacCAAGACCACCGCCTAGCCTGCGGGGATGCCATCCCTTCACAGTGCGGCCTCTCTCCACATCCACCAGCACTCTCCTTCCGTCGATCTTCTTCCCGTCTGCATGCTTGTAggcagctgggggggggggggtgagaataAGGTAGAGAAGGGTAAGTTGGAGATCTGCGGTTTTAAAGGTAAGGTTAACAAAGAGTGCATGAATATACTGACCAGGAGCAGGTGAGGTAGTGTGGAGCTGCTCTCTGGGCAGACAGACCATGTAGTAGTAGACCTTTTTCCACCACTAAATGCTGCATTTACCTGCACATCTCTTTTTCGAAGATGCACCACAGTTTAAGTACTTTGTTGTGCAAGCACTTTACTTCAGTAAATCTTTATTTTGAAACGCTAAAGAGGGATAGAATAAAGAAATTCATTCTAGACCAAAATCACAAGTGAGCCGGTATAGCAGATAAGGTTGACAAAACcgggggcctcctgggtggcacagtggtttaaggcactgcatcgcagcgctagctgtgccaccagacaCCCTGggtcgagcccaggctctgtcgcagccggcagcgtccgggaggtctgtggggcgacgcacaattggcccagcgtcatccgggagGGCTTGGCCAGCAGggttatccttgtctcatcacgcactagcaactcctgtggctggccgggcgcagtgcccgctgaccaggtcgccactgtgtttcctccgacacattggtgcggctggttggatgtgtgttgtgtcaagaagcagtgcggttgggtTGCGTTTCAGAGggcgcatggctcttgaccttcgcctctccgtacgggagttgcagcgatgagaaaaTACTAACtattaccaattggataccacgaaattggggagatttTAAGTTGACAACTTCCATTGAAAGCATTTATTAAAATCTCAAACCTTATTTTATTATATCAAGTTTGCCATATAATATATCCAAACAAAACATTGAAGTTAGGCATATAATGATTGCCCTGTTCAGGTGTGGTTTCTGTGGAGCACTAGAGACCGATAATTTAAATCTTACTTAGGTCCAGTAATGACCACACTACTGTTGAAGAGGGTCAACCGCTCACTGTTGAATGGCTCATTTTACCTTGAAGGTTCTAGTTTAGACCAAGGGTACGTAAtacttacatgctgaccacaccgctcacgTCACGTGCacaacaaaataaatgtacacgttATGCAATCATTTCACCCACACTGCTCGAGCATCTGTGTGGCCAGGCGCTTAAATATAAATTCTATTTGACGCTCAACGCGCTGCAAGTCCGGACTCTCCCAtttcattggtttttaggagcatgtACCCACGTggatgattgaaagatgaactgacgtCCACACTCCTGTTGGTTGTAGTAACGCACCGTAAAGTTAGTTGCCAAcctccatataaagtccaaagaagtaaAAGAGAACcctgagggaggtggagagatgaGACAGGAATTTGGTTtaccgttttatctgtggattaattgtcggagtagaggaccttgtgcatttcatgtAAAATAACCCAATGTATATATCCCAAGACAAATTAGCTAACAGactcaagctagctagctaaattgccataaatgtttaatgcttttcgacctgtcaccaaattaatataattgattaagagtttgttttgatattttaatctGCGTGTCCTGATCACGTCTGGTGTGGGGGTACAAAAATCAACATGCGCGCGTCCGGTTTGGTCAGCGTGTTACCCTACGCGGTCCCGAGCctgctgcttttctgttctaccttATAATagcacacctggtgtcccaggtctaaatcagtctctGATTAAGGGGAACAGGCTTCCAAGGTCcagagtggagtttagaccaatcAACGGTCTCGACTTGGCCCACAAATAAGCTAAAATATTACATCTAAGGTAGCAAGCAAAAATTCTGAAAATcaattataaactcagcaaaaataaATCCTCACAGCCAAGTTTGACATtcatgtgactaacaaaaatggtataatgtgtccctgaacaggggggaggggggtcaaaatcaaaagtaacagttggTATCTGGTGCAttatgtactgcagtgcatctcctcctcatggactgcaacagatttgccagttcttgttgtgagatattaccccactcttccaacaaggcacctgcaagttcccggacatttctgtgggtaatggtcctagccctcacccttcaATCCAACAGGCCCCAGACATgctcgatgggattgaggtccgggctcttcgctggccatgccagaacacagacattcctgtcttgcaggaaatcacgcacagaacatgcagtatggctggtggcattgtcatgctggagggtaatgtcaggatgagcctgcaggaagagtaccacatgagggaggaggatgtcttctctgttaagcacagcattgagattggaCTGCGCTTGTTGTCAAAGCAggcaatgatgctgtgacacaccgcccaaaaccatgacggaccctccacctcgatcccactccagagtataggcctcagtgtaacgcgcattcctttgacgataaaagagaatccaaccatcacccctggtgagacaaaaccacgactcgtcagtgaagagcactttttgtcagtcccgtctggtccagcgacggtgggtttgtgcccataggcgacgttgttgccggtgatgtctagtgaggacctgccttactacaacaggcctacaagccctcagtccagcctctctcagccgattgcggacagtctgagcactgatggagggattgtgcgttcctggtgtaactcgggcagttgttgccatccggatgtaccgatcctgtgcaggtgttacacgtggtctgccactgcgaggacgatcagctgtccatcctgtctccctgtagtgctgtcttgggcgtctcacagtacggacattgcaatttattgccctggccacatctgtagtcctcatgactccttgcagcatgcctaaggcacattcacgcagaggagcagggaccctgggcatctttcttttggtgttttccagagtcagtagaaaggcctttttagtgtcctaagtcctcataactgtgaccttaattatcTACCatctaagctgttagtgtcttaatgaccgttccacaggtgcatgttcattaattgtttatggttcattgaacaagaatgggaaacagtgtttaaaccctttacaatcaagacctgtgaagttatttggatttttactaattatcttttgaaagacagggtccagaaaaagggacgtttctttttttgctgagtttatatgtataCCCTTAAATTACAGTGTGCAACATGAATGGCTCATGTAGCATTGCAAAGATTTTTACATGAAACTATATTAATTTAAATAGCTCCAGTGATTTAGAAAATACCCAGCCTTTCATAACTTTAATCTCATGGGATTCTGTAAAAATGCATTAATTTAAAAGCTACGGTAATCAGATAAATAGACCATTACCAATAATGCTTTATTACTGAATACTGCGTGTCCCTAGTGGTTAGCCaacggttaagagcgttgggctagtaaccgaaaggtcggtGGTTCAAATCCGAGTAGACTAGGTgacaaatctgtcaatgtgcccttgagcaaaccCTAAcggctcctgtaagtcgctctggataagtgtgtctgctaaatgaataaaATGTAAACAAAGTAGTCCAAGCAGTTGACAGTACTTCGTTGTGGAGTGCGTTTGAGAGCCTGCTGTGAAAAATGCTTGCGCACTTGAAATTaaaatcagatgacagtaattCATGTCGCACCATATTTATGCATTTCCGCATTTTCACATCAACCTCTTACCCAGAAGGAACAGTGAATAGGCGTCACCGTGCGTCAAATCAGACACTTACCAAAGCACGTCTATCCACTTACAGGTGGAATTGGGGATTTTCTACCAGTAGCtatgtttccatccaattggcgacagatttgaATGCAAATATTCTCAAATCCAAAGTAAATGCAATTTTtcccaccaaactgacttgttgcggATTTAAAAAAAGGTGCGTGACGACGTAGTGCACACAACTTAATTTTTCGCTTAAGTTCTGATGTATAAAAATGTAAATTGAGTAGTCACAAACCTGCGTttaatagcaaatgtgcctacgcTGGTCTTGGCatgtgtgctctagccaacagatTGCATATACAGTACGGATAGGCTAGTCTACACGAGATAATGGATGAGATAATATTTTGTCACGGCAGTCaaacatcgatcatcatgtcacaagcataagaccctcgatatttattggaaaggaaaaTCAAGCTTATCGCCGTGCACTTTTCACCACACATATTTTATCGGTAGCCTATCAAACTGAATGGTTTCCCCAATTCGTAATGGGAggaccacatacacacactatatagtCATTTGATAAGATTATTATTACAATCAATATTTTGCACAAAAGGCATTTACACCGCAATTTCGCACATAATTCAATTTTATAGACAAAGATCCCACCATGCCAAACTAACAAATTCTGTGACACATTGGTTTGAGTTCCTGAATATTTACTCTGATTGCCAGAGTACACAACCTTGTATGGCAATGCTGCAATCTTCTTACCCAATATATGTTGTGCTTCAGACTATATTGAGACTAGAGTAAATTAGGTTGCCTTACATACAACCTCTGACCTTGTAATACTGGTCTAGAGGGGGAGATATAGGGGAGGGGTCATCTCAATACGAGCCAATGTTAAATGTGACCATGTTCACATACCTTAGTGGGAGTTTTATGGGCTGCTGTGTTTGTTTTTCACCAACTATCTTACCACCGCCTGGACACGAGCGCAGTGTCGGACTCAGAACCTCTCAGAGCATAGGGCTTCCAGTTGCAAGTCAACATGGCAGGCTCCTGCCAGATTTACCACATAGAAGCTGCAGCTTCTGAATCAAACTcagaacacacacaaatatatactcCCTTGGCCCAGACAGTCTTGGGATCAGTCTATTATGACCGAAGAATTCGGCGAGATCCATGATGACCCATCCTGGCCTCTACACTGGTCTGCTCTGCTGTGGTAGACGATCCAATGGGAAACGGCACAGAGGACTCTTTCCTCTTTATATCCAATCAGAGGGCCTTACCAGAACCACTCACTTTCATAGCCAATCTGAGGGCCTTACCAGAACCCTCTCTAGAGCATGGCAAATTATCGCTGTACTTTAATGACATCTCACACGTTTATACTACCCAGGGGGCCTTACCACAACCCCTCACTAACCTAACCAATCCAGGTTTGTCTTACCACAAACCATAACCTTCTCAACCAATCAGACAGGACTTTACTCAAACGGGGGTTGCCTTACCTCGACCCCAAAAACGACTCGAAAACATGGCCTAAATACAATCTTACTATACAAGCACACATACGGTGCATatccaaaaaatatttttttaagaaACAGAAAGGTATGTATCTACAGAAAATTGGATGTGTTTGGTGTAGGCTAGAATAAATGTAGGCTAGTAAAAGTGGTGACATGTTTCCTCACTAGACTGGTTCTATTAGCTGTATACACGGGATCCTTGCTATCAGCTGTGCTAAAGAGATCTGGGGGTGAGATGACTGCCATGTCTGAATGAGCTACCGCTATGCTCTTGTTGGCATCTGCTCTTGCCTAGTTATATAGTAGGGACAAAGCTAAATGTGCGCATAAGTATGTGCCTTGCTGTAAAAGTGTTTAGAGTCCCTTCGTAACCCTATTCCATTAAAGCCAGCTCAACGCACACAAGAAAGGACCTTAACTTACAATGCTAGGGGATTTTGTTTTGGACGTGTGGTCTTTTTGATGCAATGTTATGCAATATATTGCCCTTTTCTTAATGATTATGCAAGAGACAACTTGATAAAATGCTGTTTCAGACAACTAAAATACTCAAATAGTAAAAGCACTTCGGTCTATTTGTAAAAAACAAAGTGCTAAAATGGATACATCTGAGGTGGCTTTAACACAAAAGGAAAACTCATAGGGCACCCAATAACTGACTAATGGCCTGGGGGGGTGCATTCAATGGTCAAAGCACCAGCGCCATCTTATTAATGTCAATATTGTTCAAGCAACATAAGCAGCttcaaacaaaaatgtgctttgcCCATTGAACGTAGCTCCTCTTCCCTAAATAGGATGGAGGGTGGAAAGAAAGCTTACCCATCATACAAACCCATCATACCAACCATATACTGAGCTGTGGTAGTAGGGTGTAGATGTatcataaccatcatcatcatcatcatcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2561237 True 8802 lncRNA 0.45 3 45161391 45170698

Neighbor

gene id symbol gene type direction distance location
LOC110521915 LOC106583920 coding downstream 35657 45058017 ~ 45125734 (-)
LOC110521913 LOC106600694 coding downstream 110925 45046984 ~ 45050466 (-)
LOC110521016 LOC106583918 coding downstream 115563 45022318 ~ 45045828 (-)
tmg2 tmg2 coding downstream 143552 45009471 ~ 45017839 (-)
LOC110521015 LOC106583894 coding downstream 158122 44950503 ~ 45003269 (-)
LOC110521017 NA coding upstream 154458 45325156 ~ 45325993 (-)
LOC110521921 LOC106583928 coding upstream 223339 45394037 ~ 45445844 (-)
LOC110521925 LOC106583885 coding upstream 409785 45580483 ~ 45601096 (-)
LOC110521926 vatl coding upstream 432464 45603162 ~ 45612629 (-)
LOC110521018 NA coding upstream 443477 45614175 ~ 45627629 (-)
G2240386 NA non-coding downstream 13929 45146902 ~ 45147462 (-)
G2240385 NA non-coding downstream 14587 45146536 ~ 45146804 (-)
G2240384 LOC106584099 non-coding downstream 14983 45146066 ~ 45146408 (-)
G2240380 NA non-coding downstream 17860 45143319 ~ 45143531 (-)
G2240359 prmt1 non-coding downstream 22080 45131883 ~ 45139311 (-)
G2240425 NA non-coding upstream 34023 45204721 ~ 45204937 (-)
G2240447 NA non-coding upstream 51922 45222620 ~ 45222856 (-)
G2240449 NA non-coding upstream 52703 45223401 ~ 45223698 (-)
G2240593 NA non-coding upstream 161983 45332681 ~ 45332921 (-)
G2240596 NA non-coding upstream 162630 45333328 ~ 45333552 (-)
G2240022 aldoa other downstream 428081 44721963 ~ 44733310 (-)
G2239635 LOC106583937 other downstream 878023 44282136 ~ 44283368 (-)
G2237814 NA other downstream 2417799 42742894 ~ 42743592 (-)
G2237502 NA other downstream 2880029 42280756 ~ 42281362 (-)
LOC110521929 LOC106583891 other upstream 704573 45875271 ~ 45885821 (-)
G2241718 NA other upstream 1121212 46291910 ~ 46301730 (-)

Expression

G2240367 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
End of interactive chart.

G2240367 Expression in each Bioproject

Bar chart with 21 bars.
G2240367 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network