G2240456


Basic Information

Item Value
gene id G2240456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 45230285 ~ 45321010 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2561332
atttagcctcaagtaaataatgaaacatgttcaatttggtttaaataatgcaaaaacaaagtgttggagaagaaagtaaaagtgcaatatgtgctatgtaagaaagctaacgtttcagttccttgttcagaacatgagaacatatgaaagctggtggttccttttaacatgagtcttcaatattcccaggtaagaagttttaggttgtagttattataggaattataggactatttccctctatataccatttgtatttcattaacctttgactattggatgttcttataggcactttagtattgccagtgtaacagtatagcttccgtccctctcctcgctcctccctgggctcgaaccaggaacacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2561332 True 370 lncRNA 0.36 3 45230285 45321010

Neighbor

gene id symbol gene type direction distance location
LOC110521917 LOC106583923 coding upstream 59581 45150366 ~ 45170704 (+)
LOC118945915 NA coding upstream 72677 45157530 ~ 45157608 (+)
LOC110521916 prmt1 coding upstream 90969 45131760 ~ 45139316 (+)
LOC110521014 rcn3 coding upstream 381931 44838387 ~ 44848354 (+)
LOC110521908 LOC106583914 coding upstream 426760 44784210 ~ 44803525 (+)
LOC110521919 NA coding downstream 36842 45357852 ~ 45365288 (+)
LOC110521920 LOC106583926 coding downstream 47686 45368696 ~ 45382880 (+)
LOC110521922 hn1l coding downstream 126540 45447550 ~ 45461566 (+)
LOC110521924 mapk8ip3 coding downstream 159524 45480534 ~ 45557435 (+)
LOC110521928 LOC106583890 coding downstream 523449 45844459 ~ 45862555 (+)
G2240273 NA non-coding upstream 81633 45148445 ~ 45148652 (+)
G2240272 NA non-coding upstream 82742 45147026 ~ 45147543 (+)
G2240270 NA non-coding upstream 85383 45144640 ~ 45144902 (+)
G2240269 NA non-coding upstream 87018 45143060 ~ 45143267 (+)
G2240268 NA non-coding upstream 87538 45142528 ~ 45142747 (+)
G2240592 NA non-coding downstream 11535 45332545 ~ 45332769 (+)
G2240599 NA non-coding downstream 15058 45336068 ~ 45336436 (+)
G2240605 NA non-coding downstream 16962 45337972 ~ 45338187 (+)
G2240607 NA non-coding downstream 17341 45338351 ~ 45338599 (+)
G2240221 LOC106583920 other upstream 104575 45058017 ~ 45125710 (+)
G2240165 NA other upstream 264748 44964770 ~ 44965537 (+)
G2239933 NA other upstream 369949 44853478 ~ 44860893 (+)
G2239510 NA other upstream 655007 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 666667 44555495 ~ 44563618 (+)
LOC110521020 LOC107658484 other downstream 840194 46161172 ~ 46190655 (+)

Expression


Co-expression Network