G2240599


Basic Information

Item Value
gene id G2240599
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 45336068 ~ 45336436 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2561486
tatattggcatcgaacatgtcacacTCCCTAGGAGAAGGGGTGACCTTGatcatttattgttaaaacgagaggctgcctggatctttaacttaaagacccttgcgcccttcggtctcaacgtagactttgatctgaagccattcttgtgattattgtgactttgccattgtaattgtttgtaagcttgtgtagtcaaattaatctatgatcgtatgctatccatttgttgtttgtatgctgttctttgtatgacattttaatatttgataattaaccaaggatattaggccactcttggccatgattacagacacctgtgtcttttgacactacataAACGAGTCCTCccacagtgtttgtgattatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2561486 True 369 lncRNA 0.38 1 45336068 45336436

Neighbor

gene id symbol gene type direction distance location
LOC110521918 LOC106583924 coding upstream 28238 45305514 ~ 45307830 (+)
LOC110521917 LOC106583923 coding upstream 165364 45150366 ~ 45170704 (+)
LOC118945915 NA coding upstream 178460 45157530 ~ 45157608 (+)
LOC110521916 prmt1 coding upstream 196752 45131760 ~ 45139316 (+)
LOC110521014 rcn3 coding upstream 487714 44838387 ~ 44848354 (+)
LOC110521919 NA coding downstream 21416 45357852 ~ 45365288 (+)
LOC110521920 LOC106583926 coding downstream 32260 45368696 ~ 45382880 (+)
LOC110521922 hn1l coding downstream 111114 45447550 ~ 45461566 (+)
LOC110521924 mapk8ip3 coding downstream 144098 45480534 ~ 45557435 (+)
LOC110521928 LOC106583890 coding downstream 508023 45844459 ~ 45862555 (+)
G2240592 NA non-coding upstream 3299 45332545 ~ 45332769 (+)
G2240456 NA non-coding upstream 15058 45230285 ~ 45321010 (+)
G2240273 NA non-coding upstream 187416 45148445 ~ 45148652 (+)
G2240272 NA non-coding upstream 188525 45147026 ~ 45147543 (+)
G2240270 NA non-coding upstream 191166 45144640 ~ 45144902 (+)
G2240605 NA non-coding downstream 1536 45337972 ~ 45338187 (+)
G2240607 NA non-coding downstream 1915 45338351 ~ 45338599 (+)
G2240631 NA non-coding downstream 60867 45397303 ~ 45398450 (+)
G2240662 NA non-coding downstream 126870 45463306 ~ 45463912 (+)
G2240221 LOC106583920 other upstream 210358 45058017 ~ 45125710 (+)
G2240165 NA other upstream 370531 44964770 ~ 44965537 (+)
G2239933 NA other upstream 475732 44853478 ~ 44860893 (+)
G2239510 NA other upstream 760790 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 772450 44555495 ~ 44563618 (+)
LOC110521020 LOC107658484 other downstream 824768 46161172 ~ 46190655 (+)

Expression


Co-expression Network