G2241382


Basic Information

Item Value
gene id G2241382
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 45992020 ~ 45992254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2562370
ttacacatgatagcgacctgtgTTCCATGGTttctctacagacataggaattctcctgttggactttattgaagatttatgataacaacatcctaaagattgattctattctttgtttgacaagtttcttcgtctcagattattgcatggtttgccttttccgtaaagtttaaaaaaaatctgacacagcggttgcattaacgagaggtatatctatatttccatgacTAACAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2562370 True 235 lncRNA 0.34 1 45992020 45992254

Neighbor

gene id symbol gene type direction distance location
LOC110521932 LOC106583880 coding upstream 11701 45935243 ~ 45980319 (+)
LOC110521931 LOC106600938 coding upstream 58076 45928279 ~ 45933944 (+)
LOC110521928 LOC106583890 coding upstream 129465 45844459 ~ 45862555 (+)
LOC110521924 mapk8ip3 coding upstream 434585 45480534 ~ 45557435 (+)
LOC110521922 hn1l coding upstream 530454 45447550 ~ 45461566 (+)
LOC110521019 tr-alpha coding downstream 70629 46062883 ~ 46088097 (+)
LOC110521935 NA coding downstream 147684 46139938 ~ 46146858 (+)
LOC118945812 NA coding downstream 161128 46153382 ~ 46157357 (+)
LOC110521020 LOC107658484 coding downstream 168918 46161172 ~ 46190655 (+)
LOC110521021 LOC106600940 coding downstream 194209 46186463 ~ 46214766 (+)
G2241380 NA non-coding upstream 2041 45989679 ~ 45989979 (+)
G2241375 NA non-coding upstream 6135 45981838 ~ 45985885 (+)
G2241291 NA non-coding upstream 65323 45921519 ~ 45926697 (+)
G2241240 NA non-coding upstream 125977 45865831 ~ 45866043 (+)
G2241224 NA non-coding upstream 131296 45857890 ~ 45860724 (+)
G2241383 NA non-coding downstream 449 45992703 ~ 45992976 (+)
G2241387 NA non-coding downstream 5055 45997309 ~ 46005540 (+)
G2241392 NA non-coding downstream 9499 46001753 ~ 46009934 (+)
G2241393 NA non-coding downstream 12129 46004383 ~ 46012483 (+)
G2241398 NA non-coding downstream 22042 46014296 ~ 46018538 (+)
G2240221 LOC106583920 other upstream 866310 45058017 ~ 45125710 (+)
G2240165 NA other upstream 1026483 44964770 ~ 44965537 (+)
G2239933 NA other upstream 1131684 44853478 ~ 44860893 (+)
G2239510 NA other upstream 1416742 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 1428402 44555495 ~ 44563618 (+)

Expression


Co-expression Network