G2241398


Basic Information

Item Value
gene id G2241398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 46014296 ~ 46018538 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2562388
agtatgtgccaggggcaccggtttgtgtcaagaaccgcaacacggacgtttaaaaaaaaaaatttttgttagaataattgttttgtattttgtatatagttatttgcatcAATGTATTACTGTACCAATTTAGCCACTTGGGTGCATTTGGGAAGCTTGTGAGGGACACCTGGGTGTCTTCATGCTCAATGGCATGTATCTCCCTCATTCCTGAAGGTATCTGTCTGAAACTTTGGTCAAATACTGTTGCCCACTTATGTTCTTATTTGCAATTATCCCCAGCATCATATCTCaatgtttggctgttcttgttAATTTCAAAGATGCAACAAAATTAAAAGAACAGAACATGTCTGattatttccttgtattttcttctaccagatctattgtgttattctcctacagtCAATTCACATTTTCACAaccttcagagtgtttcctttcaaatgataccaataatatgcatatcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2562388 True 474 lncRNA 0.36 2 46014296 46018538

Neighbor

gene id symbol gene type direction distance location
LOC110521932 LOC106583880 coding upstream 33977 45935243 ~ 45980319 (+)
LOC110521931 LOC106600938 coding upstream 80352 45928279 ~ 45933944 (+)
LOC110521928 LOC106583890 coding upstream 151741 45844459 ~ 45862555 (+)
LOC110521924 mapk8ip3 coding upstream 456861 45480534 ~ 45557435 (+)
LOC110521922 hn1l coding upstream 552730 45447550 ~ 45461566 (+)
LOC110521019 tr-alpha coding downstream 44345 46062883 ~ 46088097 (+)
LOC110521935 NA coding downstream 121400 46139938 ~ 46146858 (+)
LOC118945812 NA coding downstream 134844 46153382 ~ 46157357 (+)
LOC110521020 LOC107658484 coding downstream 142634 46161172 ~ 46190655 (+)
LOC110521021 LOC106600940 coding downstream 167925 46186463 ~ 46214766 (+)
G2241393 NA non-coding upstream 1813 46004383 ~ 46012483 (+)
G2241392 NA non-coding upstream 4362 46001753 ~ 46009934 (+)
G2241387 NA non-coding upstream 8756 45997309 ~ 46005540 (+)
G2241383 NA non-coding upstream 21320 45992703 ~ 45992976 (+)
G2241382 NA non-coding upstream 22042 45992020 ~ 45992254 (+)
G2241428 NA non-coding downstream 33977 46052515 ~ 46053711 (+)
G2241471 NA non-coding downstream 110308 46128846 ~ 46129104 (+)
G2241473 NA non-coding downstream 113413 46131951 ~ 46132500 (+)
G2241373 NA non-coding downstream 133076 46151614 ~ 46152373 (+)
G2240221 LOC106583920 other upstream 888586 45058017 ~ 45125710 (+)
G2240165 NA other upstream 1048759 44964770 ~ 44965537 (+)
G2239933 NA other upstream 1153960 44853478 ~ 44860893 (+)
G2239510 NA other upstream 1439018 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 1450678 44555495 ~ 44563618 (+)

Expression


Co-expression Network