G2241471


Basic Information

Item Value
gene id G2241471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 46128846 ~ 46129104 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2562461
aaacataaaccttttaccttatcataggTAGAcaaattgcaaatgattaaatccttccaatagaaagaAAACCATTTTTTGTTACAAAAAGAACTTGAATTAAATTAGTTGAGtgttcacatgggatgatttcactgaacaacaaaataaagggaatactgaatgatccccaatgatccattgcatctcctaaaaacgttttcaacatacattgGGGCAAACAATTATTTGGTCAGCCCCCAattttgcaagttctccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2562461 True 259 lncRNA 0.33 1 46128846 46129104

Neighbor

gene id symbol gene type direction distance location
LOC110521019 tr-alpha coding upstream 40749 46062883 ~ 46088097 (+)
LOC110521932 LOC106583880 coding upstream 148527 45935243 ~ 45980319 (+)
LOC110521931 LOC106600938 coding upstream 194902 45928279 ~ 45933944 (+)
LOC110521928 LOC106583890 coding upstream 266291 45844459 ~ 45862555 (+)
LOC110521924 mapk8ip3 coding upstream 571411 45480534 ~ 45557435 (+)
LOC110521935 NA coding downstream 10834 46139938 ~ 46146858 (+)
LOC118945812 NA coding downstream 24278 46153382 ~ 46157357 (+)
LOC110521020 LOC107658484 coding downstream 32068 46161172 ~ 46190655 (+)
LOC110521021 LOC106600940 coding downstream 57359 46186463 ~ 46214766 (+)
LOC110520961 LOC106600945 coding downstream 115030 46244134 ~ 46245101 (+)
G2241428 NA non-coding upstream 75135 46052515 ~ 46053711 (+)
G2241398 NA non-coding upstream 110308 46014296 ~ 46018538 (+)
G2241393 NA non-coding upstream 116363 46004383 ~ 46012483 (+)
G2241392 NA non-coding upstream 118912 46001753 ~ 46009934 (+)
G2241387 NA non-coding upstream 123306 45997309 ~ 46005540 (+)
G2241473 NA non-coding downstream 2847 46131951 ~ 46132500 (+)
G2241373 NA non-coding downstream 22510 46151614 ~ 46152373 (+)
G2241374 NA non-coding downstream 23547 46152651 ~ 46152958 (+)
G2241489 NA non-coding downstream 67154 46196258 ~ 46240927 (+)
G2240221 LOC106583920 other upstream 1003136 45058017 ~ 45125710 (+)
G2240165 NA other upstream 1163309 44964770 ~ 44965537 (+)
G2239933 NA other upstream 1268510 44853478 ~ 44860893 (+)
G2239510 NA other upstream 1553568 44574856 ~ 44575278 (+)
LOC110521895 LOC103040367 other upstream 1565228 44555495 ~ 44563618 (+)

Expression


Co-expression Network