Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118945992 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 4787439 ~ 4788320 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036969659.1 | True | 882 | mRNA | 0.67 | 1 | 4787439 | 4788320 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504469 | LOC106612313 | coding | downstream | 193134 | 4589433 ~ 4594305 (-) |
| LOC110513918 | syub | coding | downstream | 496948 | 4236169 ~ 4290491 (-) |
| LOC110504518 | LOC106612310 | coding | downstream | 587496 | 4130654 ~ 4199943 (-) |
| higd2a | LOC106612309 | coding | downstream | 686723 | 4098767 ~ 4100716 (-) |
| LOC110489654 | LOC104930052 | coding | downstream | 729273 | 3968916 ~ 4058166 (-) |
| LOC110504358 | LOC106604155 | coding | upstream | 700409 | 5488729 ~ 5526792 (-) |
| LOC110504491 | LOC106604157 | coding | upstream | 744539 | 5532859 ~ 5604780 (-) |
| LOC110504359 | LOC106612272 | coding | upstream | 919098 | 5707418 ~ 5731006 (-) |
| LOC118946011 | NA | coding | upstream | 950974 | 5739294 ~ 5740052 (-) |
| LOC110504499 | LOC106604166 | coding | upstream | 1327794 | 6116114 ~ 6422429 (-) |
| G2245270 | NA | non-coding | downstream | 54101 | 4733066 ~ 4733338 (-) |
| G2245265 | NA | non-coding | downstream | 57732 | 4729352 ~ 4729707 (-) |
| G2245260 | NA | non-coding | downstream | 62706 | 4724417 ~ 4724733 (-) |
| G2245238 | NA | non-coding | downstream | 79055 | 4708181 ~ 4708384 (-) |
| G2245219 | NA | non-coding | downstream | 90917 | 4658687 ~ 4696522 (-) |
| G2245352 | NA | non-coding | upstream | 52422 | 4840742 ~ 4841111 (-) |
| G2245358 | NA | non-coding | upstream | 55869 | 4844189 ~ 4846096 (-) |
| G2245376 | NA | non-coding | upstream | 75400 | 4863720 ~ 4863974 (-) |
| G2245487 | NA | non-coding | upstream | 168657 | 4956977 ~ 4960423 (-) |
| G2245500 | NA | non-coding | upstream | 197957 | 4986277 ~ 4986786 (-) |
| G2245152 | ctnna1 | other | downstream | 165449 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 674438 | 4111702 ~ 4113001 (-) |
| G2243801 | NA | other | downstream | 1849897 | 2936604 ~ 2937542 (-) |
| G2243777 | NA | other | downstream | 1899980 | 2885291 ~ 2887459 (-) |
| G2246314 | NA | other | upstream | 1059799 | 5848119 ~ 5852599 (-) |
| G2247416 | NA | other | upstream | 2082267 | 6870587 ~ 6871100 (-) |
| G2247565 | NA | other | upstream | 2150303 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 2467024 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 3252556 | 8040876 ~ 8041480 (-) |
