Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118946011 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 5739294 ~ 5740052 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005041140.1 | True | 232 | mRNA | 0.42 | 3 | 5739294 | 5740052 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504359 | LOC106612272 | coding | downstream | 8288 | 5707418 ~ 5731006 (-) |
| LOC110504491 | LOC106604157 | coding | downstream | 134514 | 5532859 ~ 5604780 (-) |
| LOC110504358 | LOC106604155 | coding | downstream | 212502 | 5488729 ~ 5526792 (-) |
| LOC118945992 | NA | coding | downstream | 950974 | 4787439 ~ 4788320 (-) |
| LOC110504469 | LOC106612313 | coding | downstream | 1144989 | 4589433 ~ 4594305 (-) |
| LOC110504499 | LOC106604166 | coding | upstream | 376062 | 6116114 ~ 6422429 (-) |
| LOC110504506 | LOC106612265 | coding | upstream | 1387817 | 7127869 ~ 7201500 (-) |
| LOC110504480 | LOC106612296 | coding | upstream | 1958131 | 7698183 ~ 7725792 (-) |
| LOC110504483 | LOC106612297 | coding | upstream | 2095191 | 7835243 ~ 7849870 (-) |
| LOC110504356 | LOC106612292 | coding | upstream | 2118073 | 7858125 ~ 7871099 (-) |
| G2246276 | NA | non-coding | downstream | 36284 | 5701779 ~ 5703010 (-) |
| G2246275 | NA | non-coding | downstream | 39737 | 5699352 ~ 5699557 (-) |
| G2246274 | NA | non-coding | downstream | 40670 | 5698411 ~ 5698624 (-) |
| G2246247 | NA | non-coding | downstream | 101021 | 5637995 ~ 5638273 (-) |
| G2246252 | NA | non-coding | upstream | 37754 | 5777806 ~ 5779449 (-) |
| G2246299 | NA | non-coding | upstream | 49677 | 5789729 ~ 5790048 (-) |
| G2246311 | NA | non-coding | upstream | 66349 | 5806401 ~ 5806606 (-) |
| G2246336 | NA | non-coding | upstream | 125180 | 5865232 ~ 5865567 (-) |
| G2246354 | NA | non-coding | upstream | 151842 | 5891894 ~ 5892336 (-) |
| G2245152 | ctnna1 | other | downstream | 1117304 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 1626293 | 4111702 ~ 4113001 (-) |
| higd2a | LOC106612309 | other | downstream | 1638622 | 4098767 ~ 4100716 (-) |
| G2243801 | NA | other | downstream | 2801752 | 2936604 ~ 2937542 (-) |
| G2243777 | NA | other | downstream | 2851835 | 2885291 ~ 2887459 (-) |
| G2246314 | NA | other | upstream | 108067 | 5848119 ~ 5852599 (-) |
| G2247416 | NA | other | upstream | 1130535 | 6870587 ~ 6871100 (-) |
| G2247565 | NA | other | upstream | 1198571 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 1515292 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 2300824 | 8040876 ~ 8041480 (-) |
