nudcd2 (nudcd2)


Basic Information

Item Value
gene id nudcd2
gene name nudcd2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 9548387 ~ 9552601 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021583315.2
AAACTCAACTAGCGAGGAAGTAACTCCAGGATGTTTCTGGAAGAACTAACTGACTGGCGTAAACACTGTCCTATACAATTTTGGTCATATTTTCTAGCCAGTTTATGCGTATAAGTATATGTTTTGGAATGGTTACATATCGTTATGTCGGTACAAGTTAGGACCTGAACATCGTTTGAGAGAATAAACAACATTTAGCTAGCCGGTTAGCTAAGTATCAGATCAGGAGGCGTGAGAGGGTCGCTAGCCAGCAGCATGTCGGTCCACTTCGAGGAGAGAAGCGGCGTTATCCCGTGTAAAACACCATGGGGAAACTGGTCCCAAACCATGGAGGAGGTATTTATTGAAGTGAATGTACCACATGGGACGTCTGGCAAAGAAGTCAAATGTAACCTGGGATCCAAACAGATAGAACTACACGTCAAAGGAAAACAAGTCTTCAAGGGTAAATTATTTGGCATCACTGTTGCGGATGAAGGAACGTGGACATTAGAGGACAAGTGTCTGATTCGTATCGTGCTGATGAAGACGAACAGGGAGGCAGGTAACTGCTGGTCCTCTCTGCTAGAGGGAGAGTACTGTGCTGATGCCTGGCTCCAGGACCAGATGCAGAGGAAACTAACTCTGGAGAGGTTCCAGAGAGAGAACCCTGGCTTTGACTTCAGTGGAGCAGAGATCTCTGGGAACTTTGCAGGTGGTGGTCCAGACTTCTCCAGCTTGCAGAAGTGACAGTTGTTAAACAGCAAAGGGGACCCACCCCACTGTACACTATGTCCGAGACTGTCAAATGGACACTGTTGAGGCTTGCTAAGGCCTAGGGGGTGAAGAGATTGTGCTGTGTttataaccaagtgggaaggtggtatttACAACATACGACTGGGGAAAATCCGTTAAGgcccctccaactggtaattactggTGGGAAAGTACTTGTTATATCGGCTATCATCCCTGAGCACCGACTCGtcccacatgctgacctctcGTCACCTACAAATTAAATGACATTTTCAGCAGTTAAATCTAAATGTTTTTGAACACTTGTTTACAAGCATGGTGTTTCTCAACCGTTCAAAGCATATGAATGCAGCCAACTGATATTTTCAACTTCACAACTTATTACCACCTTCCCGCTTTGGTTATGAACTCAGTGCAGGATGAGCAGTTGCCTTTGGGCAAAGATCAGACAATGATTAGAATATTCTATAATTTGAAACTATAAGCCATAACTGTATAAACCCACATCCTGCCTTTTCTTTCAACCCTTGTATACATTTAGGATTGgcttttttttttgtattctgCCAAACCTTTCAGACTGCATTGCCACAATTCAGTTAAATAGCTGTCGGTATGGAAATTCTGCTGTGGCTTTATAATAAATGGCTGAAAAGTT

Function

symbol description
nudcd2 Predicted to enable unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be active in cytoplasm. Orthologous to human NUDCD2 (NudC domain containing 2).

NR:

description
nudC domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021583315.2 True 1399 mRNA 0.44 4 9548387 9552601

Neighbor

gene id symbol gene type direction distance location
LOC110504533 sfxn1 coding upstream 299421 9224032 ~ 9248966 (+)
LOC110504529 pp2aa coding upstream 327161 9211817 ~ 9221226 (+)
LOC110504364 ccdc69 coding upstream 610737 8901765 ~ 8937650 (+)
gdf9 LOC106612229 coding downstream 31645 9584246 ~ 9590828 (+)
LOC110504554 LOC106604229 coding downstream 47477 9600078 ~ 9602977 (+)
LOC110504537 LOC100380717 coding downstream 51218 9603819 ~ 9617333 (+)
LOC110504547 LOC106612224 coding downstream 64831 9617432 ~ 9622394 (+)
LOC110504549 LOC106612225 coding downstream 69881 9622482 ~ 9638162 (+)
G2249813 NA non-coding upstream 4215 9542466 ~ 9544172 (+)
G2249812 NA non-coding upstream 6406 9540148 ~ 9541981 (+)
G2249794 NA non-coding upstream 45896 9501874 ~ 9502491 (+)
G2249734 LOC106591829 non-coding upstream 62321 9406063 ~ 9486066 (+)
G2249767 NA non-coding upstream 73437 9472044 ~ 9474950 (+)
G2249776 LOC106612227 non-coding downstream 7514 9560115 ~ 9570892 (+)
G2249823 NA non-coding downstream 31721 9584322 ~ 9584581 (+)
G2249847 NA non-coding downstream 101597 9654198 ~ 9658851 (+)
G2249911 NA non-coding downstream 196425 9749026 ~ 9853206 (+)
G2249928 NA non-coding downstream 230113 9782714 ~ 9783812 (+)
G2249785 LOC106604237 other upstream 61465 9486245 ~ 9486922 (+)
G2249418 LOC106612241 other upstream 437065 9106708 ~ 9111322 (+)
G2249058 NA other upstream 714012 8831981 ~ 8834375 (+)
G2247754 NA other upstream 2311458 7236526 ~ 7236929 (+)
G2247747 NA other upstream 2323541 7224214 ~ 7224846 (+)
G2250462 NA other downstream 676319 10228920 ~ 10229999 (+)
G2251174 NA other downstream 1643999 11196600 ~ 11199436 (+)
G2251181 NA other downstream 1660725 11213326 ~ 11213968 (+)
G2251155 ogt other downstream 1664074 11216675 ~ 11295004 (+)

Expression

nudcd2(nudcd2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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nudcd2(nudcd2) Expression in each Bioproject

Bar chart with 21 bars.
nudcd2(nudcd2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network