arhgef9b (LOC106612186)


Basic Information

Item Value
gene id arhgef9b
gene name LOC106612186
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 12024777 ~ 12104658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036970558.1
TCTGGCTGCTGATCATATGTTGCCGGTCCCTCTATCCACTGTCTGCGTAGGAGCGTTTTATCATCTGACTGTCGGCGTCTGCTGCTTGAGTTTAAAGGGCAAGAGTGTTCATCATTCTCTATGCTCAGAGAGAAAACTTTGAACATTTCAGAGTTTTGAGGAGGATTTCTAGAACCCAAGGAGTTTAGCCCGCGTCATAAAACTTCGCCTGAAAACTCGCCACAGCATAATTTCCGCGTTACTCATGGATATAAAAAGTTTACCAGGTGGGAAGTCAACCGCTGTTTTTGCATCCGATTTACTGTAATTGAAAGATGACGTTTTGTCCAGAATTATTGAGGAGTTTCAGCTCTTGAAAGCCGATTGGTGTGTGTGGGAGTGAAAGAGATGGTGCGGTTCGGAGCCGATAGCTGACGGAGCCAATAGCTGACGGAGCTGATAGCTGACGGAGCTGATAGCCGACGGAGCTGATAACTGACAGAGCCGATAGCTGACGGAGCTGATAGCCGACGGAGCTGATAACTGACAGAGCTGTAGCAGGATGAGATGAGAGAGGATGGAACACATGGACAGCCCCGCCTCCCACAGCAACGACCCCAACGGGTTTGTCAATAAAGTCTTCAACGTGTCTCTGGATGTGCAGAATGAAACTGGCACCGTATCTATCCAGGAGACTGGGAAGGGAGAGGGTCATGGAGAAGGTCCGGGGCCAGGCCAAGCCCAGAGAGAGTGGCAGGAGGCtggggatagacagacagacacccaggcaCCCCCTCAGACACCTGGAAAGGAGCGCCCGGAGGTCAACCGTAGAACAAGAGCGACTGGGGGCATCTGGAAGATCTTGACCCGGCGTAGAGTGGCCTCAGAGCTGGATAACAGAAGACCTCACTCCATGATCCTCCCTGGAGAGGAGGCCTTCATCCCTAAACTGTCCTTCGCTGACAAGGTCCGCTCCATCAAGAAGCTCCGCTCTCCGGGTGTCTTCAAGGGGAGGGTGGGGAAGATGTCTGGGTCCAGCACTAAgttcagagatggagagatggaggacgaCTCGTTCTGCCGGGACTTCCTCCCCTCACCCGGCCTGCACCCCTGTAGGAGCACACTCCGCCACCGTGCAAAGAGGCATTCGTATGCCGGACACACCGCCGAGTTCGACTGCTCATTTGAGGACATTGATCTGACAGCTACCCTGGACAGACACCATCTTCACGCACTAGTGGAGCCTCTTACACAGAACGGCTCTAAGCCCACAGAGAGAATCTCCTACTCCAAGAGACCTCAGGTCCAGGCGCAGGCTCAGGCCAACCACTCCTCTAACTGTAACAGTACCTCAGCAGGAGTGTGTGAGGAGCAGAGTGTGAGGGGCAGCCCCAAGGTCCAGCTGGGTGGGAAGAGATCTAAGAGAGCTGACGTGTGGAGTTACCTGAGGAGGATCTCTGTCCTGGGGAAGGGGAACCCGGCTTACTCAGAGAGGAGTTTTGACTCAGAGCTCCACACACTGGACAAGACCATGGACTCTGACTACGGCTCGGTGGACTTCGAGAGCGTCAGGGACTTTCAACCAGCGGCTCCAAAGCACTCTGACAGCAAAGGCGGACATTTTGGGGGTCTGATTAAGTTCTTCAGCAACGTTGCGGAGACGGCTAGAAAATGGCGGACGTCTTCgcgctccttctctcctccagaggagggaggggagcggTCGCTGCTGGGCTCCCCCAGAGCAGGGCAGCATCTGGGGGACTACGTCCACAGTGTGTCCCTAACCCTCCGCAGTGAGGACCACCCAGAATGTCCCCCAACACCCGCCTCACCCCTGACCCCTCACCCCCCTCGCTCCCCTGCCTGTGACCCTGCCTCACCCCCTCCTCTAATAGGCAGACGGTCTCCTCAGGTGATGCTGAAGGCATGGAGGGTGAGTCCGGACTCACCAAGCGTTAACGGCCTGGTGTGTGTGACCTCAttggagacggacagacagatggacagacagacagagagacagacggacagacagacggacagacagacagagagacagacgcgGCACACGTCTGTAGCCACAGTAGAGAATCACGAGCCACACTcaaggctggagagagagactcagaaagagagagagacagaggtagacagagaTCCCTTAGAATGTCTGTCtacagtggaagagagagaaagcgagggaggggagggaggagagggacattcAGGAAATTACCTGGATTCCAAGGATGCTCTAACTGTCTCAGAGCAGACACACCTTCCAAACGGCCAATCAGAGTTACGGGAAGGAGAGATCGTAGCCACTAGGGAACCAGCAGGAAACTGCCACCTAGAAGTATTTAAGGCCCTGTCTCGTCCCCTGGGGGCATCACCTTTAGAGCCCCCCCTCAGAGTGTCTCTTCAGAGgtgtcactccctccctctcccccccagcATCCTCACCACTCTGGCCCTGTTCCCGGGACACACAGCAGACTCCCAGTCATCCTCAGTGTGTCTTGGTGATGGAGAGGCTGGCAGCTGCAGGAGGAGACTGCTCAGAACAGGCTCTGGTCCACTACAAGTCAACATCTTGATAAGTGGAGGATCTATCGTCAGCGCTGAGGCAGTATGGGACCATGTGACCATGGCCGACCGAGAGTTGGCGTTTAAGGCCGGTGATGTCATCAAGGTGCTGGACGCGTCCAATAAGGACTGGTGGTGGGGTCAGATCGACGAGGAGGAGGGCTGGTTCCCCGCCAGCTTCGTACGGCTATGGGTGAACCAGGAGGATGGGGGGGTGGAGCCTGTGGAGGGGACCAGTGAAATGGCTAACGGTCACCTGGATCCGACCAACGACTGCCTGTGCCTGGGCTCGCCGCTTCAGAACCGTGACCAGATGAGAGCCAACGTCATCAATGAGATTATGAGCACAGAGAGACACTACATCAAACACCTCAAGGACATCTGTGAGGGCTACCTGCGTCAGTGTAGGAAGAGGGTAGACATGTTTAACGATGACCAGCTGAGGGTGATCTTTGGGAACATCGAGGACATCTACCGTTTCCAGATGGGCTTCGTTAGAGACCTGGAGAAACAATACAACAACGAGGAACCACACCTGTCTGAGATAGGACCCTGCTTTCTAGAACATCAAGACGGCTTCTGGATCTACTCTGAGTACTGTAACAACCACCTGGACGCCTGTATGGAGCTGTCCAAGCTGATGAGAGACGGGAGGTACCAGCACTTCTTCGAGGCCTGCCGTCTGCTGCAGCAGATGATCGACATCGCTATCGACGGCTTCCTCCTCACACCCGTACAGAAGATCTGCAAATACCCCCTGCAGCTGGCCGAGCTGCTCAAATACACTGCACAGGAACACAGTGACTATCGCTACGTGGCGGCGGCGCTGGCGGTGATGCGTAACGTCACTCAGCAGATcaatgagaggaagaggaggctggagAACATTGACAAGATCGCCCAATGGCAGGCCTCCGTCCTAGACTGGGAGGGTGATGACATCCTGGACCGGAGCTCGGAGTTGATCTATACAGGAGAAATGTCTTGGATCTACCAGCCTTATGGACGCAGTCAGCAACGGGTCTTCTTCCTCTTTGATCACCAGCTGGTCCTCTGTAAGAAGgacCTGATTCGTAGGGACATCCTGTACTATAAGGGCCGTATCGACATGGACCGCTATGACGTGCGGGACGCCATCGACGGTCGCGATGACGACTTCAACGTGAGCGTGAAGAACGCGTTCAAATTGCACAACAAAGACAGCGAGGAGCTCCACATCTTCCTGTCCAAGAAACAGGAGGAGAAGATGCGATGGCTCCGGGCTTTCCACGAGGAGAGAAAGATGGTGCAGGAGGATGAGAAAAtcgGGTTTGAGATCTCAGAGTACCAGAAGCGTCAGGCAGCTCTGACCGTGAGGAAGGTATCTAAACAGAAAGGTGTGAACAGATGCGTGCCCCCCTACCCCCCTCCCCAGGACCCCCTACCCCTGGGACAGTATGACTTAACAGAGGACTTGGCACAAGCAGAGGTTTTTGAATTCAGTCAATCAAAACGAGGCCAAAACGAGGTCTCTTTTCTGGCACGACAATTCTACTAGATTAACACCTTTTAAGAAATAGAGAAACAGACTCTTTCCAAGGACCATCTATTTTTTTCTGAGAAACACTCAAACTAAATTGTTTGGAAGATTACATCATCGTCCTGTGAAGAAGAATTGACGACGAAAAAAAGAACCACTGAAGGAAGGACCAATGATGTTTCATTGTGAGTAGTCACCCAGGAGACTGGAGAACTATGGATTGTAACTTCTTCACTTCATTCTAACTGTTCTTAGTTCTGAGTTCCAATGCTTCTCTCCTTCAGTAGACACTACTGTTCcatactgaactgtactgtacaggAATCTACTACTACATCCCTCAACCCCACCATCGCCATCTGAATGTCCTGGATTCATGGAGATAGCTTTTATTTGGTTCTTTTCAGGCTCTGGCGTTTTTCCATATTTGAAGTAAGCATATTTAATGTTTCTTTACCAGAACTAGTGAGTccacctacctacagtacagtataactgtgtagatgacaggtgttgtgttgatgtgtgtgtctgtgaggattATGTTGTTGTGATTGTGGCCTGAGGTGCACTGTAATAATGAGGCTGAGGTGGcatcctatttcctacatagtgggGTAGGGTGCCACTTTGACAGACAGGAGAGCTGTTGGCTGGTTCCGATGTTTCTCAGAAGTTCTGTTGTCAGCATCACCTGTCCCATCAAAGACTGGTcagaccatctctctctctctctgtctctctctctgtctctctctcttttctctatcCCCTCTGTCTATCTTTCTGAAATAAACAgtacaaaattaacagtaaacaatacactcgcgaaaggaatagagacatttcatatgtcatattatgtctatatacagtgttgtaatgatgtgcaaatagtctctctctcttctctttaccctgtatc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106612186 isoform X6

GO: NA

KEGG:

id description
K20686 ARHGEF9; Rho guanine nucleotide exchange factor 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036970558.1 True 5018 mRNA 0.52 14 12024777 12104658
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118946000 NA coding upstream 334586 11689493 ~ 11690191 (+)
LOC110504367 LOC106612214 coding upstream 651660 11362386 ~ 11373117 (+)
fhdc2 LOC106612215 coding upstream 665250 11325225 ~ 11359527 (+)
cetn2 LOC106612201 coding upstream 843062 11175508 ~ 11181715 (+)
fut11 fut11 coding upstream 904948 11114529 ~ 11119829 (+)
LOC118946001 LOC106604264 coding downstream 19101 12123759 ~ 12143730 (+)
LOC110504575 LOC106604268 coding downstream 55082 12159740 ~ 12170990 (+)
LOC110504580 LOC106604267 coding downstream 67637 12172295 ~ 12209703 (+)
LOC110504592 NA coding downstream 451331 12555989 ~ 12577114 (+)
LOC110504589 LOC106612129 coding downstream 460525 12565183 ~ 12567051 (+)
G2252194 NA non-coding upstream 10849 12013709 ~ 12013928 (+)
G2252192 NA non-coding upstream 14132 12010412 ~ 12010645 (+)
G2252190 NA non-coding upstream 21196 12003368 ~ 12003581 (+)
G2252189 NA non-coding upstream 23140 12001415 ~ 12001637 (+)
G2252115 NA non-coding upstream 86125 11863840 ~ 11938652 (+)
G2252166 NA non-coding downstream 1292 12105950 ~ 12107544 (+)
G2252239 LOC106604272 non-coding downstream 12202 12116860 ~ 12117674 (+)
G2252240 NA non-coding downstream 13210 12117868 ~ 12118300 (+)
G2252172 NA non-coding downstream 21978 12126636 ~ 12127094 (+)
G2252241 NA non-coding downstream 23493 12128151 ~ 12128643 (+)
G2251155 ogt other upstream 729773 11216675 ~ 11295004 (+)
G2251181 NA other upstream 810809 11213326 ~ 11213968 (+)
G2251174 NA other upstream 825341 11196600 ~ 11199436 (+)
G2250462 NA other upstream 1794778 10228920 ~ 10229999 (+)
LOC110504554 LOC106604229 other upstream 2421825 9600078 ~ 9602977 (+)
G2252269 NA other downstream 115102 12219760 ~ 12225495 (+)
G2252277 NA other downstream 139035 12243693 ~ 12244026 (+)
G2252383 NA other downstream 343237 12447895 ~ 12448732 (+)
G2252822 NA other downstream 511647 12616305 ~ 12616677 (+)
G2253021 NA other downstream 876646 12981304 ~ 12981975 (+)

Expression

arhgef9b(LOC106612186) Expression in all Baseline Samples

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arhgef9b(LOC106612186) Expression in each Bioproject

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arhgef9b(LOC106612186) Expression in each Sample
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Co-expression Network