XLOC_000412 (CR339054.7)



Basic Information


Item Value
gene id XLOC_000412
gene name CR339054.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 34696503 ~ 34727517 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00000705
acattatagTGTAATTGTGGAATCAGAtgatttctttagttacttatacaaaatccaggagaatataaatatTGTTCCCCTGCTATttgatggtaagttTATCGagagaacaaaaaaggatatcggtgatctaatgatttgccttaatTTTGTGTCTGaggtcctCAAAAACGTTTGTGATGTGACAACCAGTTTTGAAGGGGTAGCTATAAAGGTAAACAGTAAGTTAGTTTTTACCCCCTTTGACAAAGAGCTATTTcaacaaaTAATAAAATCACAAGCAATgataaataaagcaaaactaaaaaagaaGCACACAAACCGAATAATACCTCTATTTTGCAACAGCCCATCAAAGATACGTCACACCCTAAATAACTTTAAACACgttgtgtttttcaaagttaaatttgttaactctgataataaaattcagttgatgtattttaaggatgccggggttaaacccctactcttttcgaaggacgaaatgtcactggagcggtgttcTCATAAGGATCATTTAAGTTCATCCAGGCGTGATGATGAGATGTTGCAAACGTTCATTTCCTCAAATgaagggtgtctctccggctcaatc

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109513

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00000705 True 601 mRNA 0.35 23 34696503 34727517

Neighbor


gene id symbol gene type direction distance location
XLOC_000410 gpalpp1 coding upstream 2138 34685405 ~ 34694365 (+)
XLOC_000409 klf12a coding upstream 137699 34496855 ~ 34558804 (+)
XLOC_000408 NA coding upstream 242056 34450659 ~ 34454447 (+)
XLOC_000407 CR848003.1 coding upstream 296149 34400240 ~ 34400354 (+)
XLOC_000406 kctd12.2 coding upstream 399100 34295925 ~ 34297403 (+)
XLOC_000413 zgc:172122 coding downstream 36022 34763539 ~ 34807059 (+)
XLOC_000414 NA coding downstream 129851 34857368 ~ 34861057 (+)
XLOC_000415 NA coding downstream 306777 35034294 ~ 35093512 (+)
XLOC_000416 sc:d189 coding downstream 466937 35194454 ~ 35234700 (+)
XLOC_000417 usp38 coding downstream 745702 35473219 ~ 35491005 (+)
XLOC_000403 dre-mir-734 non-coding upstream 573531 34122880 ~ 34122972 (+)
XLOC_000401 CT573012.1 non-coding upstream 729230 33967157 ~ 33967273 (+)
XLOC_000400 CU915566.1 non-coding upstream 961369 33735018 ~ 33735134 (+)
XLOC_000421 NA non-coding downstream 1168875 35896392 ~ 35898437 (+)
XLOC_000425 BX324156.1 non-coding downstream 1426744 36154261 ~ 36154377 (+)
XLOC_000431 NA non-coding downstream 2238483 36966000 ~ 36966282 (+)

Expression



Co-expression Network