Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118946066 |
| gene name | LOC106612041 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 17899918 ~ 17901911 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|---|
| K09087 | HES2_6_7; hairy and enhancer of split 2/6/7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036970349.1 | True | 1461 | mRNA | 0.50 | 4 | 17899918 | 17901911 |
17,896,000
17,896,400
17,896,800
17,897,200
17,897,600
17,898,000
17,898,400
17,898,800
17,899,200
17,899,600
17,900,000
17,900,400
17,900,800
17,901,200
17,901,600
17,902,000
17,902,400
17,902,800
17,903,200
17,903,600
NC_050571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pfdn6 | pfd6 | coding | upstream | 36521 | 17861620 ~ 17863397 (+) |
| ints6l | ints6l | coding | upstream | 58711 | 17808296 ~ 17841330 (+) |
| pabir2 | LOC106612047 | coding | upstream | 100002 | 17791203 ~ 17799916 (+) |
| hprt1 | hprt1 | coding | upstream | 122234 | 17756118 ~ 17777684 (+) |
| phf6 | phf6 | coding | upstream | 144081 | 17748643 ~ 17755837 (+) |
| micu3b | LOC106612036 | coding | downstream | 69222 | 17971133 ~ 18010807 (+) |
| zdhhc2 | zdhhc2 | coding | downstream | 109407 | 18011318 ~ 18037582 (+) |
| slc7a2 | slc7a2 | coding | downstream | 213254 | 18115165 ~ 18149361 (+) |
| pdgfrl | pdgfrl | coding | downstream | 247576 | 18149487 ~ 18158267 (+) |
| LOC118946046 | NA | coding | downstream | 324499 | 18226410 ~ 18229260 (+) |
| G2257070 | tmm32 | non-coding | upstream | 39634 | 17858012 ~ 17860284 (+) |
| G2257062 | NA | non-coding | upstream | 53345 | 17845281 ~ 17846573 (+) |
| G2257041 | NA | non-coding | upstream | 55508 | 17843822 ~ 17844410 (+) |
| G2257038 | NA | non-coding | upstream | 96283 | 17803032 ~ 17803635 (+) |
| G2257148 | NA | non-coding | downstream | 90173 | 17992084 ~ 17992990 (+) |
| G2257149 | NA | non-coding | downstream | 91940 | 17993851 ~ 17995090 (+) |
| G2257165 | NA | non-coding | downstream | 119415 | 18021326 ~ 18021726 (+) |
| G2257199 | NA | non-coding | downstream | 185171 | 18087082 ~ 18087807 (+) |
| G2257245 | NA | non-coding | downstream | 322513 | 18224424 ~ 18224639 (+) |
| G2256867 | NA | other | upstream | 453988 | 17445566 ~ 17445930 (+) |
| G2256788 | NA | other | upstream | 549573 | 17291119 ~ 17350345 (+) |
| G2256591 | LOC106594957 | other | upstream | 1066074 | 16828805 ~ 16833844 (+) |
| G2256563 | LOC106612100 | other | upstream | 1121893 | 16776894 ~ 16778025 (+) |
| G2256494 | NA | other | upstream | 1216135 | 16683002 ~ 16683783 (+) |
| LOC110504399 | LOC106611959 | other | downstream | 2685780 | 20587691 ~ 20876250 (+) |
| G2261028 | NA | other | downstream | 3044822 | 20946733 ~ 20947525 (+) |
| G2261334 | NA | other | downstream | 3540745 | 21442656 ~ 21443007 (+) |
| G2261414 | fchsd1 | other | downstream | 3849904 | 21751815 ~ 21772260 (+) |
