Item | Value |
---|---|
gene id | micu3b |
gene name | LOC106612036 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050571.1 |
NCBI id | CM025858.1 |
chromosome length | 44108611 |
location | 17971133 ~ 18010807 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
calcium uptake protein 3, mitochondrial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036969585.1 | False | 3290 | mRNA | 0.42 | 15 | 17971133 | 18010807 |
XM_036969586.1 | False | 3248 | mRNA | 0.42 | 14 | 17971133 | 18010807 |
XM_036969587.1 | False | 3197 | mRNA | 0.41 | 14 | 17971133 | 18010807 |
XM_036969588.1 | False | 3155 | mRNA | 0.41 | 13 | 17971133 | 18010807 |
XR_005041132.1 | False | 3173 | mRNA | 0.42 | 16 | 17971133 | 18010807 |
TU2581940 | True | 3111 | TUCP | 0.41 | 5 | 17996747 | 18010795 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118946066 | LOC106612041 | coding | upstream | 69222 | 17899918 ~ 17901911 (+) |
pfdn6 | pfd6 | coding | upstream | 107736 | 17861620 ~ 17863397 (+) |
ints6l | ints6l | coding | upstream | 129926 | 17808296 ~ 17841330 (+) |
pabir2 | LOC106612047 | coding | upstream | 171217 | 17791203 ~ 17799916 (+) |
hprt1 | hprt1 | coding | upstream | 193449 | 17756118 ~ 17777684 (+) |
zdhhc2 | zdhhc2 | coding | downstream | 511 | 18011318 ~ 18037582 (+) |
slc7a2 | slc7a2 | coding | downstream | 104358 | 18115165 ~ 18149361 (+) |
pdgfrl | pdgfrl | coding | downstream | 138680 | 18149487 ~ 18158267 (+) |
LOC118946046 | NA | coding | downstream | 215603 | 18226410 ~ 18229260 (+) |
LOC110504394 | fat1 | coding | downstream | 226161 | 18236968 ~ 18307769 (+) |
G2257070 | tmm32 | non-coding | upstream | 110849 | 17858012 ~ 17860284 (+) |
G2257062 | NA | non-coding | upstream | 124560 | 17845281 ~ 17846573 (+) |
G2257041 | NA | non-coding | upstream | 126723 | 17843822 ~ 17844410 (+) |
G2257038 | NA | non-coding | upstream | 167498 | 17803032 ~ 17803635 (+) |
G2257165 | NA | non-coding | downstream | 10519 | 18021326 ~ 18021726 (+) |
G2257199 | NA | non-coding | downstream | 76275 | 18087082 ~ 18087807 (+) |
G2257245 | NA | non-coding | downstream | 213617 | 18224424 ~ 18224639 (+) |
G2257246 | NA | non-coding | downstream | 213981 | 18224788 ~ 18225024 (+) |
G2257247 | NA | non-coding | downstream | 215151 | 18225958 ~ 18226248 (+) |
G2256867 | NA | other | upstream | 525203 | 17445566 ~ 17445930 (+) |
G2256788 | NA | other | upstream | 620788 | 17291119 ~ 17350345 (+) |
G2256591 | LOC106594957 | other | upstream | 1137289 | 16828805 ~ 16833844 (+) |
G2256563 | LOC106612100 | other | upstream | 1193108 | 16776894 ~ 16778025 (+) |
G2256494 | NA | other | upstream | 1287350 | 16683002 ~ 16683783 (+) |
LOC110504399 | LOC106611959 | other | downstream | 2576884 | 20587691 ~ 20876250 (+) |
G2261028 | NA | other | downstream | 2935926 | 20946733 ~ 20947525 (+) |
G2261334 | NA | other | downstream | 3431849 | 21442656 ~ 21443007 (+) |
G2261414 | fchsd1 | other | downstream | 3741008 | 21751815 ~ 21772260 (+) |
LOC110504779 | LOC106612009 | other | downstream | 3937017 | 21947801 ~ 21953127 (+) |
G2257149 | NA | non-coding | upstream | 1657 | 17993851 ~ 17995090 (+) |
G2257148 | NA | non-coding | upstream | 3757 | 17992084 ~ 17992990 (+) |