Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110504728 |
| gene name | stox2 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 18754876 ~ 18857438 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| stox2 | Involved in embryo development and maternal placenta development. |
| description |
|---|
| storkhead-box protein 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036970401.1 | False | 5293 | mRNA | 0.51 | 4 | 18754876 | 18780318 |
| XM_021583523.2 | False | 6438 | mRNA | 0.52 | 4 | 18754876 | 18822172 |
| XM_021583522.2 | False | 5868 | mRNA | 0.51 | 4 | 18754876 | 18857438 |
| TU2583857 | False | 2062 | TUCP | 0.44 | 2 | 18755616 | 18760274 |
| TU2583860 | True | 692 | TUCP | 0.58 | 3 | 18762079 | 18821032 |
18,660,000
18,680,000
18,700,000
18,720,000
18,740,000
18,760,000
18,780,000
18,800,000
18,820,000
18,840,000
18,860,000
NC_050571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489625 | LOC106561442 | coding | downstream | 6760 | 18734549 ~ 18748116 (-) |
| LOC110504725 | LOC106612015 | coding | downstream | 40508 | 18686438 ~ 18714368 (-) |
| cenpu | LOC106612016 | coding | downstream | 68508 | 18679562 ~ 18686368 (-) |
| casp3b | casp3 | coding | downstream | 78351 | 18670673 ~ 18676525 (-) |
| irf2 | irf2 | coding | downstream | 84981 | 18658229 ~ 18669895 (-) |
| trappc11 | trappc11 | coding | upstream | 9184 | 18866622 ~ 18883174 (-) |
| ptcd3 | ptcd3 | coding | upstream | 58625 | 18916063 ~ 18923776 (-) |
| atoh8 | atoh8 | coding | upstream | 95883 | 18953321 ~ 18961807 (-) |
| LOC110504740 | al3a2 | coding | upstream | 137598 | 18993971 ~ 19027009 (-) |
| uvssa | uvssa | coding | upstream | 287846 | 19145284 ~ 19175319 (-) |
| G2258803 | NA | non-coding | downstream | 4975 | 18749316 ~ 18749901 (-) |
| G2258747 | NA | non-coding | downstream | 125119 | 18620228 ~ 18629757 (-) |
| G2258738 | NA | non-coding | downstream | 150356 | 18604245 ~ 18604520 (-) |
| G2258736 | NA | non-coding | downstream | 152855 | 18601692 ~ 18602021 (-) |
| G2258712 | sorbs2 | non-coding | downstream | 197399 | 18557017 ~ 18557477 (-) |
| G2258891 | NA | non-coding | upstream | 37484 | 18894922 ~ 18895015 (-) |
| G2258886 | NA | non-coding | upstream | 94928 | 18952366 ~ 18952801 (-) |
| G2258921 | NA | non-coding | upstream | 110476 | 18967914 ~ 18968308 (-) |
| G2258929 | NA | non-coding | upstream | 143015 | 19000453 ~ 19002636 (-) |
| G2258266 | NA | other | downstream | 386218 | 18368267 ~ 18368658 (-) |
| G2258118 | NA | other | downstream | 524417 | 18230150 ~ 18230459 (-) |
| G2258072 | pdgfrl | other | downstream | 596609 | 18152030 ~ 18158267 (-) |
| cnot7 | LOC103366853 | other | downstream | 707414 | 18036030 ~ 18047530 (-) |
| G2259893 | NA | other | upstream | 969332 | 19826770 ~ 19827165 (-) |
| G2260507 | LOC106611993 | other | upstream | 1391245 | 20248683 ~ 20252627 (-) |
| G2262026 | NA | other | upstream | 2418111 | 21275549 ~ 21276337 (-) |
| G2262119 | NA | other | upstream | 2583161 | 21440599 ~ 21440968 (-) |
| G2262186 | NA | other | upstream | 2676185 | 21533623 ~ 21534129 (-) |
| G2258843 | NA | non-coding | upstream | 2984 | 18824016 ~ 18864398 (-) |
