Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110504767 |
| gene name | LOC106611984 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 21116128 ~ 21549042 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| X-linked interleukin-1 receptor accessory protein-like 2 |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0004908 | interleukin-1 receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021583579.2 | False | 4182 | mRNA | 0.46 | 11 | 21116128 | 21549042 |
| TU2586500 | True | 80 | lncRNA | 0.56 | 1 | 21461981 | 21462060 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504765 | LOC106611985 | coding | upstream | 100137 | 21010125 ~ 21015991 (+) |
| LOC110504763 | LOC106611989 | coding | upstream | 130752 | 20958946 ~ 20985376 (+) |
| LOC110504399 | LOC106611959 | coding | upstream | 239878 | 20587691 ~ 20876250 (+) |
| fmr1 | LOC106611992 | coding | upstream | 545671 | 20561652 ~ 20570457 (+) |
| LOC118946045 | NA | coding | upstream | 559390 | 20553416 ~ 20556738 (+) |
| LOC110504401 | LOC106611981 | coding | downstream | 9558 | 21558600 ~ 21690698 (+) |
| LOC110504768 | LOC106611982 | coding | downstream | 153025 | 21702067 ~ 21713619 (+) |
| rell2 | LOC106611958 | coding | downstream | 178089 | 21727131 ~ 21742081 (+) |
| LOC110504772 | LOC106611979 | coding | downstream | 239628 | 21788670 ~ 21798544 (+) |
| LOC110504773 | LOC106611978 | coding | downstream | 250381 | 21799423 ~ 21857880 (+) |
| G2261123 | NA | non-coding | upstream | 53711 | 21062171 ~ 21062417 (+) |
| G2261112 | NA | non-coding | upstream | 72083 | 21043790 ~ 21044045 (+) |
| G2261108 | NA | non-coding | upstream | 79323 | 21036458 ~ 21036805 (+) |
| G2261099 | LOC106612010 | non-coding | upstream | 90117 | 21025780 ~ 21026011 (+) |
| G2261095 | NA | non-coding | upstream | 95330 | 21020599 ~ 21020798 (+) |
| G2261447 | NA | non-coding | downstream | 65996 | 21615038 ~ 21616432 (+) |
| G2261461 | NA | non-coding | downstream | 114551 | 21663593 ~ 21663833 (+) |
| G2261470 | NA | non-coding | downstream | 133076 | 21682118 ~ 21682464 (+) |
| G2261477 | NA | non-coding | downstream | 148413 | 21697455 ~ 21697735 (+) |
| G2261028 | NA | other | upstream | 168603 | 20946733 ~ 20947525 (+) |
| micu3b | LOC106612036 | other | upstream | 3105333 | 17971133 ~ 18010807 (+) |
| G2256867 | NA | other | upstream | 3670198 | 17445566 ~ 17445930 (+) |
| G2256788 | NA | other | upstream | 3765783 | 17291119 ~ 17350345 (+) |
| G2261414 | fchsd1 | other | downstream | 202773 | 21751815 ~ 21772260 (+) |
| LOC110504779 | LOC106612009 | other | downstream | 398782 | 21947801 ~ 21953127 (+) |
| G2261587 | NA | other | downstream | 459070 | 22008112 ~ 22008748 (+) |
| G2262601 | NA | other | downstream | 720676 | 22269718 ~ 22273707 (+) |
| G2263926 | NA | other | downstream | 1976298 | 23525340 ~ 23526020 (+) |
| G2261340 | NA | non-coding | upstream | 6082 | 21455688 ~ 21455899 (+) |
| G2261331 | NA | non-coding | upstream | 29928 | 21431853 ~ 21432053 (+) |
| G2261323 | NA | non-coding | upstream | 43230 | 21418487 ~ 21418751 (+) |
| G2261322 | NA | non-coding | upstream | 43650 | 21418017 ~ 21418331 (+) |
| G2261321 | NA | non-coding | upstream | 45278 | 21416344 ~ 21416703 (+) |
| G2261363 | NA | non-coding | downstream | 22662 | 21484722 ~ 21485293 (+) |
| G2261366 | NA | non-coding | downstream | 30365 | 21492425 ~ 21492701 (+) |
| G2261369 | NA | non-coding | downstream | 32465 | 21494525 ~ 21494766 (+) |
| G2261382 | NA | non-coding | downstream | 49830 | 21511890 ~ 21512151 (+) |
| G2261388 | NA | non-coding | downstream | 61535 | 21523595 ~ 21523872 (+) |
| G2261334 | NA | other | upstream | 18974 | 21442656 ~ 21443007 (+) |
