Gene
RNA
| Item | Value |
|---|---|
| gene id | trmt12 |
| gene name | LOC106611794 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 28155421 ~ 28163913 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 2 homolog |
| id | description |
|---|---|
| K07055 | TRM12, TYW2; tRNA wybutosine-synthesizing protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036970093.1 | True | 1316 | mRNA | 0.46 | 11 | 28155421 | 28163913 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504919 | LOC106611705 | coding | upstream | 89694 | 28057412 ~ 28065727 (+) |
| LOC118946038 | NA | coding | upstream | 98996 | 28054388 ~ 28056425 (+) |
| LOC110504914 | LOC106611700 | coding | upstream | 145099 | 27987952 ~ 28010322 (+) |
| LOC110504912 | LOC106611698 | coding | upstream | 193602 | 27958738 ~ 27961819 (+) |
| LOC110504911 | NA | coding | upstream | 201273 | 27953112 ~ 27954152 (+) |
| sytl4 | LOC106611707 | coding | downstream | 6548 | 28170461 ~ 28188340 (+) |
| LOC110504926 | tsn7 | coding | downstream | 34760 | 28198673 ~ 28209723 (+) |
| LOC110504927 | NA | coding | downstream | 61524 | 28225437 ~ 28244563 (+) |
| LOC110504299 | NA | coding | downstream | 92533 | 28256446 ~ 28307408 (+) |
| m1ip1 | m1ip1 | coding | downstream | 138491 | 28302404 ~ 28304890 (+) |
| G2268038 | NA | non-coding | upstream | 18697 | 28136520 ~ 28136724 (+) |
| G2268037 | NA | non-coding | upstream | 18980 | 28136160 ~ 28136441 (+) |
| G2268036 | NA | non-coding | upstream | 19534 | 28135541 ~ 28135887 (+) |
| G2268035 | LOC106611706 | non-coding | upstream | 27868 | 28126741 ~ 28127553 (+) |
| G2267999 | LOC106611703 | non-coding | upstream | 77393 | 28073526 ~ 28078028 (+) |
| G2268058 | NA | non-coding | downstream | 4321 | 28168234 ~ 28168601 (+) |
| G2268059 | NA | non-coding | downstream | 5095 | 28169008 ~ 28169512 (+) |
| G2268060 | NA | non-coding | downstream | 5825 | 28169738 ~ 28170065 (+) |
| G2268078 | NA | non-coding | downstream | 49721 | 28213634 ~ 28214329 (+) |
| G2268088 | NA | non-coding | downstream | 55730 | 28219643 ~ 28219948 (+) |
| G2266826 | NA | other | upstream | 1219532 | 26934720 ~ 26935889 (+) |
| G2266668 | LOC106611853 | other | upstream | 1534473 | 26588592 ~ 26620948 (+) |
| LOC110504416 | diaph1 | other | upstream | 1782938 | 26298775 ~ 26483992 (+) |
| LOC118946064 | NA | other | upstream | 1863417 | 26289725 ~ 26292004 (+) |
| G2265744 | NA | other | upstream | 2176783 | 25978135 ~ 25978638 (+) |
| G2268340 | NA | other | downstream | 602964 | 28766877 ~ 28767729 (+) |
| G2268400 | LOC106611722 | other | downstream | 732842 | 28896755 ~ 28898079 (+) |
| G2271027 | NA | other | downstream | 3012977 | 31176890 ~ 31181107 (+) |
| G2272912 | LOC106611792 | other | downstream | 4699523 | 32863436 ~ 32866226 (+) |
| LOC110505056 | LOC105028844 | other | downstream | 5252177 | 33328263 ~ 33421963 (+) |
