Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110504300 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 28402249 ~ 28404199 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ADP-ribosylation factor-like protein 13A |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005041208.1 | True | 1311 | mRNA | 0.42 | 3 | 28402249 | 28404199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504931 | LOC106611711 | coding | upstream | 31742 | 28358692 ~ 28370507 (+) |
| trnav-uac-98 | NA | coding | upstream | 48560 | 28353617 ~ 28353689 (+) |
| LOC110504299 | NA | coding | upstream | 94841 | 28256446 ~ 28307408 (+) |
| m1ip1 | m1ip1 | coding | upstream | 97359 | 28302404 ~ 28304890 (+) |
| LOC110504927 | NA | coding | upstream | 157686 | 28225437 ~ 28244563 (+) |
| LOC110504934 | LOC106611715 | coding | downstream | 2819 | 28407018 ~ 28409839 (+) |
| LOC110504935 | LOC106611716 | coding | downstream | 6112 | 28410311 ~ 28425659 (+) |
| LOC110504439 | LOC106611717 | coding | downstream | 31885 | 28436084 ~ 28664707 (+) |
| LOC110504936 | LOC106611718 | coding | downstream | 300204 | 28704403 ~ 28722745 (+) |
| LOC110504939 | LOC106611720 | coding | downstream | 323817 | 28728016 ~ 28748262 (+) |
| G2268153 | NA | non-coding | upstream | 6017 | 28395968 ~ 28396232 (+) |
| G2268152 | NA | non-coding | upstream | 7288 | 28394755 ~ 28394961 (+) |
| G2268151 | NA | non-coding | upstream | 7573 | 28394398 ~ 28394676 (+) |
| G2268147 | NA | non-coding | upstream | 12925 | 28388992 ~ 28389324 (+) |
| G2268133 | NA | non-coding | upstream | 49876 | 28351818 ~ 28352373 (+) |
| G2268211 | NA | non-coding | downstream | 94366 | 28498565 ~ 28498838 (+) |
| G2268214 | NA | non-coding | downstream | 101187 | 28505386 ~ 28505621 (+) |
| G2268217 | NA | non-coding | downstream | 103166 | 28507365 ~ 28507578 (+) |
| G2268220 | NA | non-coding | downstream | 106490 | 28510689 ~ 28511106 (+) |
| G2268222 | NA | non-coding | downstream | 108203 | 28512402 ~ 28512607 (+) |
| G2266826 | NA | other | upstream | 1466360 | 26934720 ~ 26935889 (+) |
| G2266668 | LOC106611853 | other | upstream | 1781301 | 26588592 ~ 26620948 (+) |
| LOC110504416 | diaph1 | other | upstream | 2029766 | 26298775 ~ 26483992 (+) |
| LOC118946064 | NA | other | upstream | 2110245 | 26289725 ~ 26292004 (+) |
| G2265744 | NA | other | upstream | 2423611 | 25978135 ~ 25978638 (+) |
| G2268340 | NA | other | downstream | 362678 | 28766877 ~ 28767729 (+) |
| G2268400 | LOC106611722 | other | downstream | 492556 | 28896755 ~ 28898079 (+) |
| G2271027 | NA | other | downstream | 2772691 | 31176890 ~ 31181107 (+) |
| G2272912 | LOC106611792 | other | downstream | 4459237 | 32863436 ~ 32866226 (+) |
| LOC110505056 | LOC105028844 | other | downstream | 5011891 | 33328263 ~ 33421963 (+) |
