LOC110504956 (LOC106611738)


Basic Information

Item Value
gene id LOC110504956
gene name LOC106611738
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 29747442 ~ 29751487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021583863.2
GGAGAGGGGGGTCTATTTCCTTTATTTGCCGGACGGTCCAACCCAACCCACAGTCAGTCAGGCGTATATCCTTTATCTATCCAAACTGTTTGCAAAGATAGTGCACTCACTGCAGCGGTCACATTGGGATCTTAACTGGATATTACAAGACAAGCTTTGGCTCTCTGCTGAAAAGACAGAAGATGGACTCAGCTATCCACAGCCACCTTGTGCGGAACCAGTCCAGTCTGATTCTGCATGCTGGGTATTCCAACGACACCTGTCGCTTCAATGAGGAGTTTAAGTACATCCTACTGCCTGTGTCCTACAGCCTGGTGTGTGTTATGGGTCTGGTGCTGAACTCAGTGGCTCTGTGGATGTTCCTGACCAAGATGCGACCGTGGAACCCCAGCACCGTCTACATGTTTCACCTGGCCCTGTCAGACTTCCTGTACGTTCTCTCCCTGCCCACCCTCATCTACTACTACGCTAACCGCAGCCACTGGCCCTTTGGCGTCGCCGCCTGCAAGATGGTCCGCTTCTTGTTCTACGCCAACCTCTACTGCAGCATCCTCTTCCTCACCTGCACCAGCGTCCACCGCTACCTGGGCATCTGCCACCCCATCAAGGCCCTGACCATGGTGAAGCCGCGCCATGCCCATGCCGTGTGTGGCATGGTGTGGGCTGCCGTCACGGCGTGTCTGGTGCCCAACCTCATCTTCGTCACCACCAGTCAGAGGGACAACGACACGTTGTGTCACGATACGACCAGTCCGGAGCAGTTTGAGGAGTATGTGGACTACAGCTCTACGGTCATGGTCCTGTTGTTCGGCGTTCCCTTCGTGGTCATCATGGTCTGTTACTGTCTGATGGCGAGGGCTCTGTGTCGGCCCAGACGGGGGCTTTCGCCCAGCCAGCGGAGCTCACCTTCACGCACCAAGTCCATCAAGCTGAttgtggtggtgctggtggtgttCGCCGTGTGTTTTGTTCCTTTCCACATCACACGCACCCTCTACTATACCTACCGCGTGCTGAATGCCAAATGTGAATTCCTGAACATCGTTAACTTTGCCTATAAGATCACCAGGCCTCTGGCCAGTGTGAACAGTTGTATTGATCCCCTCCTGTATTTCCTGGCTGGGGATCACTACCGCGCTAAGCTGGTCAAAGCTCTCACTGGTAAGAGACAGACAACCACCAGTCGCTCTGCTGCCTACCTGCAAAACCGCCCCAGTAACAACCATGAGATCGCCCTGGTCTATAAGAACTCAGACTCGAAAGCCAGCGGTGAACCTGAGAGATAGTGGGTCATTCACATGGACATCTATGGGGTATCATATATAGATATGCCTAACCTCCGTAATATAAACACGGAGAAAACGGTTAACAGTCCTGGGCTGGCCACCACACAGCTGCACTTCCTTTGGATGCTGTTCTGTCATTTCGGACACCGGATGACTACATGCTGATCGGTAGGGCCTCATTACAGAGCCCAGATCTGTGAGAGGTTCAGTTCCTATAAGGCTGTTGGGGCAAAGCCTTTCCTTAAAGGGGAATGAAGAAGTGGGCTTGGGATTGGTCAGAAAACAGATCCCTTATCACCACCAACATTTTGCAGCAGTGTTGGATGCAGTACCGTTAAATCCTATCTACATTCCCCCTTGTTAGCAAGAATCTATGTGAAAACCAAGTCtgtttaatacatttacatacagtCTCTAGTTCCTACTCTGAATGCTTTTCCGGCAGTTTCCCTCATTTTCATTGTGGCGGTTGTAGTGTTTGGAGGACAGAGTTAAAATCCTTTCAACCAGGGAAACAAAacagtctctgtgtctctgtctgagcCAGACTGTAGTTTCCTACTGTTACCACAGACTGAGGAACTACAGGAACAAAGCCTGTTTTGTACAATAGCTACAGAACTCTGAAGAGCAGAAGGAAAAACAATGTATGCAATCTGTCATCTAAATGTTTGGACTTGTGTTATTATGGCAGCACGTACTCAGAGAGAAGATTTCTGAATGGATATGACAGATGTTAAAaacagtgtgttgttgtgatcATCAAGAGAGAAGGTCAAAATCCTAGAAAACATTATTTAGACATATGATCGAAGGGTTTTCGCTGGCTTCCAGTAAGTGTGGAGGTGACATCATATTTAGCAACAGGCTCAGATATTGTGAGGCAATCTGAAACAGTTTAACAGAAACAGTGCATGTACCAGGAGACTCATTCTGGTAGATATTGGAGCTTTATCCCTCTCCCAGCTGTTTTTGTCCTTCAGCGCAGAGCCTccacagctgtctctctgtctgtctctgctgtgAGGAAACCAGGGGAGGGGTGGCGTGGGGGAGTAGAGAGACTGAATGGGTGTGTAGGCCGGAGTATCAACTCCATCCAACAACCCACACTACGGATGAAGGGGGGATTTTCCTTCATTATCCAATTGGGACGTAGACCTGCACACAACATGGCTATTTTCACACCGattttggttgttgttgttgttgacagtcTGTCCATGGCAAAGCAGATGTCTCTATAAAGTAGATTGCAAGTCAGAGGTCCGTTCCTAAGGGTACTTAAAGTACTATACTGCTATCATGTTTAAGCTACTAGTAATGTTTATAAAGGGCATTATAACCTAGGTTCAAGGTATGATAGGAAAACACTTGGTTCTATAGGTCTATAACATTATAATGACATTAAATAAAGTATATATCTACTTTTT
>XM_036970378.1
CGTTACAAGATCATTATACAGCTAATCGCAGTTCGTTGTATTTCCACTCTGATTTATTACAGTGTGTATGCAATTAAATACACAGTGGGTCGCCCGCGGTGTTGAGCCATAATATTTCAGGGGTTTTGGTTATGTGCCAGTTCTCATGAAATTGGTAGGATTAATTCCCCTGCTATTGAAAGGAAGTTACATACTTTTGAGATCAGATATTACAAGACAAGCTTTGGCTCTCTGCTGAAAAGACAGAAGATGGACTCAGCTATCCACAGCCACCTTGTGCGGAACCAGTCCAGTCTGATTCTGCATGCTGGGTATTCCAACGACACCTGTCGCTTCAATGAGGAGTTTAAGTACATCCTACTGCCTGTGTCCTACAGCCTGGTGTGTGTTATGGGTCTGGTGCTGAACTCAGTGGCTCTGTGGATGTTCCTGACCAAGATGCGACCGTGGAACCCCAGCACCGTCTACATGTTTCACCTGGCCCTGTCAGACTTCCTGTACGTTCTCTCCCTGCCCACCCTCATCTACTACTACGCTAACCGCAGCCACTGGCCCTTTGGCGTCGCCGCCTGCAAGATGGTCCGCTTCTTGTTCTACGCCAACCTCTACTGCAGCATCCTCTTCCTCACCTGCACCAGCGTCCACCGCTACCTGGGCATCTGCCACCCCATCAAGGCCCTGACCATGGTGAAGCCGCGCCATGCCCATGCCGTGTGTGGCATGGTGTGGGCTGCCGTCACGGCGTGTCTGGTGCCCAACCTCATCTTCGTCACCACCAGTCAGAGGGACAACGACACGTTGTGTCACGATACGACCAGTCCGGAGCAGTTTGAGGAGTATGTGGACTACAGCTCTACGGTCATGGTCCTGTTGTTCGGCGTTCCCTTCGTGGTCATCATGGTCTGTTACTGTCTGATGGCGAGGGCTCTGTGTCGGCCCAGACGGGGGCTTTCGCCCAGCCAGCGGAGCTCACCTTCACGCACCAAGTCCATCAAGCTGAttgtggtggtgctggtggtgttCGCCGTGTGTTTTGTTCCTTTCCACATCACACGCACCCTCTACTATACCTACCGCGTGCTGAATGCCAAATGTGAATTCCTGAACATCGTTAACTTTGCCTATAAGATCACCAGGCCTCTGGCCAGTGTGAACAGTTGTATTGATCCCCTCCTGTATTTCCTGGCTGGGGATCACTACCGCGCTAAGCTGGTCAAAGCTCTCACTGGTAAGAGACAGACAACCACCAGTCGCTCTGCTGCCTACCTGCAAAACCGCCCCAGTAACAACCATGAGATCGCCCTGGTCTATAAGAACTCAGACTCGAAAGCCAGCGGTGAACCTGAGAGATAGTGGGTCATTCACATGGACATCTATGGGGTATCATATATAGATATGCCTAACCTCCGTAATATAAACACGGAGAAAACGGTTAACAGTCCTGGGCTGGCCACCACACAGCTGCACTTCCTTTGGATGCTGTTCTGTCATTTCGGACACCGGATGACTACATGCTGATCGGTAGGGCCTCATTACAGAGCCCAGATCTGTGAGAGGTTCAGTTCCTATAAGGCTGTTGGGGCAAAGCCTTTCCTTAAAGGGGAATGAAGAAGTGGGCTTGGGATTGGTCAGAAAACAGATCCCTTATCACCACCAACATTTTGCAGCAGTGTTGGATGCAGTACCGTTAAATCCTATCTACATTCCCCCTTGTTAGCAAGAATCTATGTGAAAACCAAGTCtgtttaatacatttacatacagtCTCTAGTTCCTACTCTGAATGCTTTTCCGGCAGTTTCCCTCATTTTCATTGTGGCGGTTGTAGTGTTTGGAGGACAGAGTTAAAATCCTTTCAACCAGGGAAACAAAacagtctctgtgtctctgtctgagcCAGACTGTAGTTTCCTACTGTTACCACAGACTGAGGAACTACAGGAACAAAGCCTGTTTTGTACAATAGCTACAGAACTCTGAAGAGCAGAAGGAAAAACAATGTATGCAATCTGTCATCTAAATGTTTGGACTTGTGTTATTATGGCAGCACGTACTCAGAGAGAAGATTTCTGAATGGATATGACAGATGTTAAAaacagtgtgttgttgtgatcATCAAGAGAGAAGGTCAAAATCCTAGAAAACATTATTTAGACATATGATCGAAGGGTTTTCGCTGGCTTCCAGTAAGTGTGGAGGTGACATCATATTTAGCAACAGGCTCAGATATTGTGAGGCAATCTGAAACAGTTTAACAGAAACAGTGCATGTACCAGGAGACTCATTCTGGTAGATATTGGAGCTTTATCCCTCTCCCAGCTGTTTTTGTCCTTCAGCGCAGAGCCTccacagctgtctctctgtctgtctctgctgtgAGGAAACCAGGGGAGGGGTGGCGTGGGGGAGTAGAGAGACTGAATGGGTGTGTAGGCCGGAGTATCAACTCCATCCAACAACCCACACTACGGATGAAGGGGGGATTTTCCTTCATTATCCAATTGGGACGTAGACCTGCACACAACATGGCTATTTTCACACCGattttggttgttgttgttgttgacagtcTGTCCATGGCAAAGCAGATGTCTCTATAAAGTAGATTGCAAGTCAGAGGTCCGTTCCTAAGGGTACTTAAAGTACTATACTGCTATCATGTTTAAGCTACTAGTAATGTTTATAAAGGGCATTATAACCTAGGTTCAAGGTATGATAGGAAAACACTTGGTTCTATAGGTCTATAACATTATAATGACATTAAATAAAGTATATATCTACTTTTT
>XM_036970376.1
GGAGAGTGAGCCGCATTCAGGGGATCTGTGTttgagtgtgagctggaaagtgggctggaaagtgagctgcgttcagaggatctacgtgtttgagagtATATTACAAGACAAGCTTTGGCTCTCTGCTGAAAAGACAGAAGATGGACTCAGCTATCCACAGCCACCTTGTGCGGAACCAGTCCAGTCTGATTCTGCATGCTGGGTATTCCAACGACACCTGTCGCTTCAATGAGGAGTTTAAGTACATCCTACTGCCTGTGTCCTACAGCCTGGTGTGTGTTATGGGTCTGGTGCTGAACTCAGTGGCTCTGTGGATGTTCCTGACCAAGATGCGACCGTGGAACCCCAGCACCGTCTACATGTTTCACCTGGCCCTGTCAGACTTCCTGTACGTTCTCTCCCTGCCCACCCTCATCTACTACTACGCTAACCGCAGCCACTGGCCCTTTGGCGTCGCCGCCTGCAAGATGGTCCGCTTCTTGTTCTACGCCAACCTCTACTGCAGCATCCTCTTCCTCACCTGCACCAGCGTCCACCGCTACCTGGGCATCTGCCACCCCATCAAGGCCCTGACCATGGTGAAGCCGCGCCATGCCCATGCCGTGTGTGGCATGGTGTGGGCTGCCGTCACGGCGTGTCTGGTGCCCAACCTCATCTTCGTCACCACCAGTCAGAGGGACAACGACACGTTGTGTCACGATACGACCAGTCCGGAGCAGTTTGAGGAGTATGTGGACTACAGCTCTACGGTCATGGTCCTGTTGTTCGGCGTTCCCTTCGTGGTCATCATGGTCTGTTACTGTCTGATGGCGAGGGCTCTGTGTCGGCCCAGACGGGGGCTTTCGCCCAGCCAGCGGAGCTCACCTTCACGCACCAAGTCCATCAAGCTGAttgtggtggtgctggtggtgttCGCCGTGTGTTTTGTTCCTTTCCACATCACACGCACCCTCTACTATACCTACCGCGTGCTGAATGCCAAATGTGAATTCCTGAACATCGTTAACTTTGCCTATAAGATCACCAGGCCTCTGGCCAGTGTGAACAGTTGTATTGATCCCCTCCTGTATTTCCTGGCTGGGGATCACTACCGCGCTAAGCTGGTCAAAGCTCTCACTGGTAAGAGACAGACAACCACCAGTCGCTCTGCTGCCTACCTGCAAAACCGCCCCAGTAACAACCATGAGATCGCCCTGGTCTATAAGAACTCAGACTCGAAAGCCAGCGGTGAACCTGAGAGATAGTGGGTCATTCACATGGACATCTATGGGGTATCATATATAGATATGCCTAACCTCCGTAATATAAACACGGAGAAAACGGTTAACAGTCCTGGGCTGGCCACCACACAGCTGCACTTCCTTTGGATGCTGTTCTGTCATTTCGGACACCGGATGACTACATGCTGATCGGTAGGGCCTCATTACAGAGCCCAGATCTGTGAGAGGTTCAGTTCCTATAAGGCTGTTGGGGCAAAGCCTTTCCTTAAAGGGGAATGAAGAAGTGGGCTTGGGATTGGTCAGAAAACAGATCCCTTATCACCACCAACATTTTGCAGCAGTGTTGGATGCAGTACCGTTAAATCCTATCTACATTCCCCCTTGTTAGCAAGAATCTATGTGAAAACCAAGTCtgtttaatacatttacatacagtCTCTAGTTCCTACTCTGAATGCTTTTCCGGCAGTTTCCCTCATTTTCATTGTGGCGGTTGTAGTGTTTGGAGGACAGAGTTAAAATCCTTTCAACCAGGGAAACAAAacagtctctgtgtctctgtctgagcCAGACTGTAGTTTCCTACTGTTACCACAGACTGAGGAACTACAGGAACAAAGCCTGTTTTGTACAATAGCTACAGAACTCTGAAGAGCAGAAGGAAAAACAATGTATGCAATCTGTCATCTAAATGTTTGGACTTGTGTTATTATGGCAGCACGTACTCAGAGAGAAGATTTCTGAATGGATATGACAGATGTTAAAaacagtgtgttgttgtgatcATCAAGAGAGAAGGTCAAAATCCTAGAAAACATTATTTAGACATATGATCGAAGGGTTTTCGCTGGCTTCCAGTAAGTGTGGAGGTGACATCATATTTAGCAACAGGCTCAGATATTGTGAGGCAATCTGAAACAGTTTAACAGAAACAGTGCATGTACCAGGAGACTCATTCTGGTAGATATTGGAGCTTTATCCCTCTCCCAGCTGTTTTTGTCCTTCAGCGCAGAGCCTccacagctgtctctctgtctgtctctgctgtgAGGAAACCAGGGGAGGGGTGGCGTGGGGGAGTAGAGAGACTGAATGGGTGTGTAGGCCGGAGTATCAACTCCATCCAACAACCCACACTACGGATGAAGGGGGGATTTTCCTTCATTATCCAATTGGGACGTAGACCTGCACACAACATGGCTATTTTCACACCGattttggttgttgttgttgttgacagtcTGTCCATGGCAAAGCAGATGTCTCTATAAAGTAGATTGCAAGTCAGAGGTCCGTTCCTAAGGGTACTTAAAGTACTATACTGCTATCATGTTTAAGCTACTAGTAATGTTTATAAAGGGCATTATAACCTAGGTTCAAGGTATGATAGGAAAACACTTGGTTCTATAGGTCTATAACATTATAATGACATTAAATAAAGTATATATCTACTTTTT

Function

NR:

description
P2Y purinoceptor 4-like

GO:

id name namespace
GO:0035589 G protein-coupled purinergic nucleotide receptor signaling pathway biological_process
GO:0030321 transepithelial chloride transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0045028 G protein-coupled purinergic nucleotide receptor activity molecular_function

KEGG:

id description
K04271 P2RY4; P2Y purinoceptor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021583863.2 False 2719 mRNA 0.48 2 29747442 29750698
XM_036970378.1 False 2786 mRNA 0.48 2 29747442 29751374
XM_036970376.1 True 2677 mRNA 0.48 2 29747442 29751487

Neighbor

gene id symbol gene type direction distance location
LOC110504954 LOC106611736 coding downstream 31585 29714139 ~ 29715857 (-)
LOC110504953 LOC106611735 coding downstream 138219 29536330 ~ 29609223 (-)
mcf2a LOC106611731 coding downstream 215115 29501548 ~ 29532327 (-)
fgf13a LOC106611730 coding downstream 262969 29273993 ~ 29484473 (-)
LOC110504948 NA coding downstream 601451 29111130 ~ 29145991 (-)
LOC110504957 LOC106611739 coding upstream 11354 29762841 ~ 29794188 (-)
LOC110504962 pdzd11 coding upstream 97455 29848942 ~ 29853435 (-)
LOC110504969 LOC106611747 coding upstream 481580 30233067 ~ 30256177 (-)
LOC110504972 NA coding upstream 518502 30269989 ~ 30279397 (-)
LOC110504974 LOC106611751 coding upstream 589640 30341127 ~ 30347505 (-)
G2269819 NA non-coding downstream 67742 29679278 ~ 29679700 (-)
G2269799 NA non-coding downstream 88646 29658536 ~ 29658796 (-)
G2269793 NA non-coding downstream 98991 29648246 ~ 29648451 (-)
G2269789 NA non-coding downstream 106468 29635791 ~ 29640974 (-)
G2269768 NA non-coding downstream 151549 29594212 ~ 29595893 (-)
G2270080 NA non-coding upstream 32563 29784050 ~ 29784278 (-)
G2270098 NA non-coding upstream 58114 29809601 ~ 29809845 (-)
G2270103 NA non-coding upstream 61545 29813032 ~ 29813396 (-)
G2270106 NA non-coding upstream 65665 29817152 ~ 29817476 (-)
G2270109 LOC106611797 non-coding upstream 68846 29820333 ~ 29825752 (-)
G2269291 NA other downstream 1112143 28634930 ~ 28635299 (-)
G2269277 NA other downstream 1140654 28606400 ~ 28606788 (-)
LOC110504930 LOC106611712 other downstream 1412489 28328943 ~ 28358459 (-)
G2269004 NA other downstream 1694755 28051204 ~ 28052687 (-)
LOC118946021 LOC106611696 other downstream 1794858 27828431 ~ 27952655 (-)
G2270186 NA other upstream 318891 30070378 ~ 30072129 (-)
G2270673 LOC106611749 other upstream 532246 30283733 ~ 30319917 (-)
LOC110504988 LOC106515624 other upstream 816882 30566629 ~ 30575299 (-)
LOC110505004 LOC102314576 other upstream 1420761 31172148 ~ 31175109 (-)
G2272324 NA other upstream 2501896 32253383 ~ 32253938 (-)

Expression


Co-expression Network