Item | Value |
---|---|
gene id | LOC110504961 |
gene name | LOC106604734 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050571.1 |
NCBI id | CM025858.1 |
chromosome length | 44108611 |
location | 29830922 ~ 29838708 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: ras-related protein Rab-6A-like isoform X3 |
id | name | namespace |
---|---|---|
GO:0007264 | small GTPase mediated signal transduction | biological_process |
GO:0015031 | protein transport | biological_process |
GO:0005525 | GTP binding | molecular_function |
id | description |
---|---|
K07893 | RAB6A; Ras-related protein Rab-6A |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_002470665.2 | False | 2917 | mRNA | 0.42 | 9 | 29830922 | 29838702 |
XM_021583870.2 | False | 2821 | mRNA | 0.42 | 8 | 29830924 | 29838702 |
XM_021583868.2 | False | 2827 | mRNA | 0.42 | 8 | 29830924 | 29838708 |
XM_021583871.2 | False | 2820 | mRNA | 0.42 | 8 | 29830925 | 29838702 |
XM_021583869.2 | True | 2818 | mRNA | 0.42 | 8 | 29830927 | 29838702 |
29,823,000
29,824,000
29,825,000
29,826,000
29,827,000
29,828,000
29,829,000
29,830,000
29,831,000
29,832,000
29,833,000
29,833,000
29,834,000
29,835,000
29,836,000
29,837,000
29,838,000
29,839,000
29,840,000
29,841,000
29,842,000
29,843,000
NC_050571.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110504958 | LOC106611797 | coding | upstream | 4932 | 29817580 ~ 29825990 (+) |
f9a | LOC106611733 | coding | upstream | 329318 | 29496820 ~ 29501604 (+) |
LOC118946044 | NA | coding | upstream | 718131 | 29108044 ~ 29112791 (+) |
LOC110504946 | LOC106611728 | coding | upstream | 762388 | 29063764 ~ 29068534 (+) |
LOC110504943 | LOC106611723 | coding | upstream | 883233 | 28928741 ~ 28947689 (+) |
LOC110504959 | LOC106611740 | coding | downstream | 154 | 29838862 ~ 29847848 (+) |
LOC110504963 | LOC106611742 | coding | downstream | 34163 | 29872871 ~ 29887511 (+) |
LOC110504964 | LOC106611741 | coding | downstream | 49381 | 29888089 ~ 30069203 (+) |
LOC100136647 | LOC106611743 | coding | downstream | 276817 | 30115525 ~ 30205688 (+) |
cdx1 | cdx1 | coding | downstream | 381222 | 30219930 ~ 30223418 (+) |
G2269910 | NA | non-coding | upstream | 335 | 29830285 ~ 29830587 (+) |
G2269901 | NA | non-coding | upstream | 17502 | 29813183 ~ 29813420 (+) |
G2269886 | NA | non-coding | upstream | 42123 | 29788597 ~ 29788799 (+) |
G2269880 | NA | non-coding | upstream | 47366 | 29783338 ~ 29783556 (+) |
G2269879 | LOC106611739 | non-coding | upstream | 48100 | 29782467 ~ 29782822 (+) |
G2269919 | NA | non-coding | downstream | 79105 | 29917813 ~ 29918573 (+) |
G2269958 | NA | non-coding | downstream | 119499 | 29958207 ~ 29958876 (+) |
G2270001 | NA | non-coding | downstream | 222506 | 30061214 ~ 30062077 (+) |
G2270010 | NA | non-coding | downstream | 249241 | 30087949 ~ 30088478 (+) |
G2270258 | NA | non-coding | downstream | 269822 | 30108530 ~ 30108758 (+) |
G2268400 | LOC106611722 | other | upstream | 932843 | 28896755 ~ 28898079 (+) |
G2268340 | NA | other | upstream | 1063193 | 28766877 ~ 28767729 (+) |
G2266826 | NA | other | upstream | 2895033 | 26934720 ~ 26935889 (+) |
G2266668 | LOC106611853 | other | upstream | 3209974 | 26588592 ~ 26620948 (+) |
LOC110504416 | diaph1 | other | upstream | 3458439 | 26298775 ~ 26483992 (+) |
G2271027 | NA | other | downstream | 1338182 | 31176890 ~ 31181107 (+) |
G2272912 | LOC106611792 | other | downstream | 3024728 | 32863436 ~ 32866226 (+) |
LOC110505056 | LOC105028844 | other | downstream | 3577382 | 33328263 ~ 33421963 (+) |
LOC110505080 | LOC106611630 | other | downstream | 4363375 | 34202011 ~ 34207415 (+) |
G2274048 | NA | other | downstream | 4393287 | 34231995 ~ 34232604 (+) |