XLOC_004123 (CR555297.1)



Basic Information


Item Value
gene id XLOC_004123
gene name CR555297.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 23159189 ~ 23159307 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007873
GCTTACAGCCATACCACCCTGGGTATGCCTGATCTGGTCTGAACTCGGAAGTGAAGCAGGgttgggcctggttagtacttggttGGGAGACTGCCTGGGTATACCAGGGGCTAAAGGCA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082746

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007873 True 119 rRNA 0.55 1 23159189 23159307

Neighbor


gene id symbol gene type direction distance location
XLOC_004122 atp2b4 coding downstream 78219 22920587 ~ 23080970 (-)
XLOC_004121 mdm4 coding downstream 242548 22890997 ~ 22916641 (-)
XLOC_004120 myog coding downstream 553208 22592935 ~ 22605981 (-)
XLOC_004119 tmem183a coding downstream 787117 22363572 ~ 22372072 (-)
XLOC_004118 tfeb coding downstream 797883 22287954 ~ 22361306 (-)
XLOC_004124 optc coding upstream 46582 23205889 ~ 23219367 (-)
XLOC_004125 BX571675.2 coding upstream 146448 23305755 ~ 23309318 (-)
XLOC_004126 kiss1 coding upstream 152145 23311452 ~ 23322182 (-)
XLOC_004127 golt1a coding upstream 168477 23327784 ~ 23332592 (-)
XLOC_004128 plekha6 coding upstream 183689 23342996 ~ 23525611 (-)
XLOC_004063 CR854846.1 misc downstream 7031511 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 10467498 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 10537422 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 10567893 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 10645927 12512966 ~ 12513262 (-)
XLOC_004117 NA non-coding downstream 1064792 22089435 ~ 22094397 (-)
XLOC_004116 NA non-coding downstream 1253129 21893602 ~ 21906060 (-)
XLOC_004115 CT573222.1 non-coding downstream 1406600 21752475 ~ 21752589 (-)
XLOC_004108 NA non-coding downstream 2039216 21117620 ~ 21119973 (-)
XLOC_004104 NA non-coding downstream 2205940 20952056 ~ 20953249 (-)
XLOC_004130 LO016980.1 non-coding upstream 496043 23655350 ~ 23655478 (-)
XLOC_004131 CR354444.1 non-coding upstream 740693 23900000 ~ 23901361 (-)
XLOC_004140 NA non-coding upstream 1550477 24709784 ~ 24714293 (-)
XLOC_004141 CR628365.1 non-coding upstream 1659958 24819265 ~ 24820001 (-)

Expression



Co-expression Network