LOC110504971 (LOC106611749)



Basic Information


Item Value
gene id LOC110504971
gene name LOC106611749
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30283699 ~ 30286467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021583888.2
CCCGTTTTGTCTCGCGAACACAGTGGTATTAAATCCTCTCTCAACTAAATGGATCGGCCATTTCGACTGAGCCGGTATACCCCAGCAGTCCTTTTGTTGAACGGGAAGGTTTCCGTGTAACAACGTCCTCGATAACAACCGAAAATGAATGAGACCGTCATCTCGTTCGGCAAGGACTTCTTGGCTGGTGGTATTTCCGCTGCCATCTCCAAAACAGCTGTAGCCCCTATTGAAAGAATCAAGCTGCTTCTTCAGGTGCAACATGCTAGTAAACAGATCACCGTTGACAAGCAGTACAAGGGCATCATGGATTGCGTCGTCCGTATCCCCAAGGAGCAGGGCTTCCTGTCGTTCTGGAGAGGGAACTTGGCCAACGTCATCAGATACTTCCCCACCCAGGCCCTCAACTTTGCATTCAAGGACAAATACAAGCAAATCTTCCTGGATGGTGTGGACAAGAAACAGTTCTGGAGGTACTTCGCTGGTAACCTGGCCTCTGGCGGTGCTGCTGGAGCCACCTCCCTGTGTTTTGTGTACCCCCTCGACTTCGCCAGAACCCGACTGGCTGCTGATGTCGGTAAGGCCGGTGCTGGGCGTGAGTTCAATGGCCTGGGTGACTGCTTGAAGAAGATCTACAAGGCTGACGGTCTGAAGGGCCTGTACCAGGgcttctctgtgtctgtccaggGCATCATCATCTACAGAGCTTCTTACTTTGGTGTCTATGACACAGCCAAGGGCATGCTGCCAGATCCAAAGAACGCCAGCATCCTTGTCAGCTGGGCCATCGCGCAGTCGGTGACTGCAGTCGCCGGTCTTACATCATACCCCTTTGATACCGTCCGTCGTCGCATGATGATGCAGTCTGGGCGCAAAGGAGGTGACATCATGTACACTGGCACCATTGACTGCTGGAAGAAGATCGCGAGGGATGAGGGTGGCAAGGCCTTCTTCAAAGGAGCCTGGTCCAACGTTCTCCGAGGCATGGGTGGTGCCTTTGTGCTAGTTTTGTACGATGAGTTGAAGAAGGTCCTCTAAACTGTTTTTATGTCCACCGTAAATGTTGTGAGATGTTTAAACTGTAACATATCTTGTACAGTTGGAAGGACGGTCAAATTCCACCTTGTTTATAGGGACCAACTAGTATGTCGGTGCTAGTTGTACTGGGAAAATCAGTTCTGCACTTTTTAATTGGcccaatgtttgttttgtttgcccCCTCACCAGAATGTCATTCCCATAAAACAAAGGTAACTAAGCCAGATCTTTAAATATCAACCTGTTTCGTCCAGAtttggtcttttttttttttttgtcaatactGTAACAATAAAGGCAACCTACTGAATGAACCTACAA

Function


NR:

description
PREDICTED: ADP/ATP translocase 2-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K05863 SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021583888.2 True 1359 mRNA 0.49 4 30283699 30286467

Neighbor


gene id symbol gene type direction distance location
LOC110504970 LOC106611748 coding upstream 1252 30272277 ~ 30282447 (+)
LOC110504968 LOC106611745 coding upstream 53511 30224956 ~ 30230188 (+)
cdx1 cdx1 coding upstream 60281 30219930 ~ 30223418 (+)
LOC100136647 LOC106611743 coding upstream 78011 30115525 ~ 30205688 (+)
LOC110504964 LOC106611741 coding upstream 214496 29888089 ~ 30069203 (+)
LOC110504973 LOC106611750 coding downstream 16121 30302588 ~ 30319039 (+)
LOC110504976 mrpl11 coding downstream 35356 30321823 ~ 30383240 (+)
LOC110504981 LOC106611758 coding downstream 190215 30476682 ~ 30479893 (+)
LOC110504982 yif1a coding downstream 202097 30488564 ~ 30496448 (+)
LOC110504984 LOC106604710 coding downstream 210165 30496632 ~ 30500159 (+)
G2270407 NA non-coding upstream 19803 30263545 ~ 30263896 (+)
G2270388 NA non-coding upstream 51715 30231773 ~ 30231984 (+)
G2270382 NA non-coding upstream 67495 30215906 ~ 30216204 (+)
G2270374 NA non-coding upstream 71352 30212137 ~ 30212347 (+)
G2270364 NA non-coding upstream 75073 30208386 ~ 30208626 (+)
G2270478 NA non-coding downstream 96146 30382613 ~ 30427407 (+)
G2270553 NA non-coding downstream 238201 30524668 ~ 30524958 (+)
G2270557 NA non-coding downstream 246434 30532901 ~ 30533121 (+)
G2270573 NA non-coding downstream 256313 30542780 ~ 30543017 (+)
G2268400 LOC106611722 other upstream 1385620 28896755 ~ 28898079 (+)
G2268340 NA other upstream 1515970 28766877 ~ 28767729 (+)
G2266826 NA other upstream 3347810 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 3662751 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 3911216 26298775 ~ 26483992 (+)
G2271027 NA other downstream 890423 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 2576969 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 3129623 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3915616 34202011 ~ 34207415 (+)
G2274048 NA other downstream 3945528 34231995 ~ 34232604 (+)

Expression



Co-expression Network