LOC110504974 (LOC106611751)


Basic Information

Item Value
gene id LOC110504974
gene name LOC106611751
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30341127 ~ 30347505 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021583891.2
TGAGAGAGAACGAGGCGGGGAGCCGAGAGTATGTAACCTGCCTACAAATTAACACCGCAATCATAAACTCTAGCGGCGAGTTTCCTCATGTTTCTCTCTCGTGTCCTCGAGGTTTGCTTTACTGTCGATACTTATCTGGCCGTCTATTCCTGATCATCATTCCGCGTCAAGCAGCCGTCTACTTCTGAGCGACTTCGACAGCTCACAGAATACGGAGCCCGGCGAACAAGCCCGCACAGCTCCTTCCCGAATAACTGGATCTTCGGCTGCCAGACCGGAGAGCCAAGGTGTCAAATTCAATACGGACATACCAAGAGATGGATAATTCTGCGCCCACGATGACTGTGGGATAACTGTGCAAAATGACACGTTTATCTGATGACCGAAAAAGCAAAAGCGGCTTGACGTTTTAAATCTTACAAACTCGAAGATGGACAATTACTTTCCCCCTATTTTATCAGTATGATAAGATCGTCATAGCAGAGTGGGAGTTTGTTCAAATATTCCCGACAGACACACAGCATTATAGGTCTAACACAAAGCAACCGATGTAAAGACTAATTTAGGAATCACAGATTATCATTTTTAACCTTTAATGTTTATCCAGGGACCGTTCTAGTACGACTAATAGGCGACGTGGATCTCAATCAAACCAAGAGGAGCAGCGAAGAACGCATGCTTTGGGCATGGTGCCTACGCCCCAGGTGTGCGTATCAACCCTGGTCACGGTGAGCACCATGGCAGTGGTCGACCTCTACCTGCtggagcagagcatgctgggagCCCGTGGCAAGGCCGGGCCCGGCGTGTGGCCGTGTGCCGCTGTGTTGCTAGGTGACCTGGGCTTCCTGCTGGCTCTGCGTTTCGTGTCGGCGGGAGTGGTGTCTGAAGCGCACTCGCCTCGCCGAGGCTTTGCCAACGCACTCtggttcctcttcctgtccctgctccagctcAAACTCTTCTTTGTCTGCCAGAACTACCGAATGGAACGCCGACCGCCTGACCCCCTGGCCAGGAAGACGCTCACCTTGCTGCTGTCAGTCTGCCTGCCCTCCCTGTTCCTCATCCTGACTGGGGCTGACAACATGACGCCCCTGCGAAGGAAACAGGAAGTGCGGGGGAGGCTGCTCTGGGTTGTGGTGGACCTGCTGGATGTTCTGGACCTGCAGGCAGGGCTGTGGGAAGCCCACACAGGGGCCACTGACCTGGGGGTGCCCCTGTGGGCCGAAGGCCTGGTGTTCTTCTATTGCTAtgccctgctgctgctgctgccctgcGTGGCCCTCACAGAGCTGGGGGCCGCAGCCCTGCCGGGACAGAGGGGGCCCCGTAAGGAGGCCCTGTACCCCTGGCTTAGCCTGGTCACCATCAACGTGTTCACAATGGCCCTCAGGGGCACAGGCATGCTGTGGTACAGGGACCCCAGGGTCTCGACAGTGTTCTTGGGGAAGAACCTGCTGGCCCTGGCTGTGAAGCTGAGCTCTGCCTGGGAGAGGCACAAGCAAGGTGGGAGCAGGGGGACAGGGATGGGGGCCGGGGCGGGAGTAGAGTCAAGTATGGACTCCACCCTGGCAACTCAGAGCTCAGAGCAGACAGAAGTCCAAGCCCAAGGCAAAACCACCCCCAGGCCATCCTCTCGCAACCACACAATGTCCCGCTCCCACAGCCACTCCGTGTCACACATCAGTCTGGATCCCACAGAGACCTCTCTGGGCCCTTCCTTCATCTCCCATGAACTCTAGAAACTGTCCAGACAGACAGCTTAACAGCTGAAGCCGAGCTATCGGAACTCCCCAGTTAGGGAAGCATTTAGCACTGAATAGTGAAGACCGTTGGCCTCACACAGACGAACAAACTAAAAACAACACGTACACCCCATGCTCTGTGGACCAGCCAAGGCAATCACATCAGTAACTCATTCAATTAGCTCACTTTGGTTAAAGGGATGATTTATCCACCCCTGGGTCCTGGCAGCATGTAGTATTTGGTTAtccgagggagagagaaggctcAGGGCTGGGGCAGAGTGAGAGATGTACAGCGAAGAAGTGCCTCGCTTTTCAAGGAGCTACAATCCTCAGTACTGGTTCCACACAGACATGATTTGCGTCATATGGGACTCAGACATAATACCAtggtgtgagtcagtgtgtgtactGTGAAAGCTCTTCCACAGCTCTTGTCAGCTACACCTCCAGGACAGCTTCTAAACTGTAATAAAGTGTTTCATACTCACAGGCTCAGACACTTTATTGGCCATGTGTGGGAGGGTATTGGCAGCCTGTCACCACAACATTGGAGAAGACAGGATCAGAGGCTGACCATTCACAGTTAGTGACATCTAGTATACCCCTGAGGCCCTCTAACTTTCAAAACATCCACTGCATCAAAGCAAATGTGTTTACCCTTTACATATTCAGTGAAAACTTCAGCATTTCTTTGTTGAAGATACAGGCCGATGTTATGGATCGGGAGCTGCTGGGGTGAAGCCCTCCACACATCTGAGGCAGGCAGTGCAATGTGcgaagagagagtgacagacagcggAACAGCTATCATTTATCACAATTAGACCAGCAGCACCAGCCTGATAGGCATGCAGTGATCCTTCAGCCAGTCATCTGGCTGCTGGTCCAGCTTTAAGGTTTCAACAGTAGAGCCTGCAGATGTGctaaagtttgtgtgtgtgtgtgtgctgagcgATTAAtcatcatatattttttttttcaattattaaacaactaattgaacGATGtcggttcaattacttgaattccatttattttttgtgTGAGCCCAACACGCTGTTTCTCAAATCATTCACGAAAGAAATCAAGTCAAGAACTATGTGGGATGCTAGGCTGAAGGGTGTTGTAGTGTTCACTAAGCAAATATTCAACTTAGTTCAGCACAgaaatgtggtaattaactacaatgaccataatccactgCGCCAGCTTTTTCACTCGCCAAAATCAgcccaatgcatttctatgggcttattttgaaGCTAAACTTGCAacctgccttcccgcctttgggacaacaCCCCTTGTTAGGGCAGCGACATGAGAATATCaccattatatacagatctctgtaCGGATACAATTTTACGCCTGCTATGTTAGGTTTAGATATACACAGACCGTATGAGAAAGGAATGTACACAACGAGGGACAGAGACAGTTCTGGAAAGTATGCCTCATCTACTTTGAAGAAGTAGTAAAATTATTGACAGGCAGGCACCTCTACAGCATACTTAGGCAGGCAagctaaataggatgactacagacagtcCAGTATGAGGAGAACATAACAGAtggtctggctggctgactgctatTGCCTGAGCAGAGATTAAAAAGAATAAAGCAGTCAAATAAAACAAAGTAATATAAACTGAAATATTGAATGTCATAGTAATATCCTATTGAGGTCTACCTGATCAGAGACAATAGAATATTTTCAATATTTTGAATGCTCACCATTTGGGGCTTTGGAAGTCTATTAATTAATAAACTCTGAAATCATAGTAACGTCA

Function

NR:

description
transmembrane protein 121-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021583891.2 True 3547 mRNA 0.50 2 30341127 30347505

Neighbor

gene id symbol gene type direction distance location
LOC110504972 NA coding downstream 61730 30269989 ~ 30279397 (-)
LOC110504969 LOC106611747 coding downstream 84950 30233067 ~ 30256177 (-)
LOC110504962 pdzd11 coding downstream 487692 29848942 ~ 29853435 (-)
LOC110504957 LOC106611739 coding downstream 546939 29762841 ~ 29794188 (-)
LOC110504956 LOC106611738 coding downstream 589640 29747442 ~ 29751487 (-)
LOC110504977 LOC106611754 coding upstream 61617 30409122 ~ 30415313 (-)
LOC110504978 fbln4 coding upstream 97024 30444529 ~ 30458967 (-)
LOC110504979 LOC106611755 coding upstream 113394 30460899 ~ 30474809 (-)
LOC110504980 fosl1 coding upstream 133028 30480533 ~ 30485003 (-)
LOC110504987 LOC106611762 coding upstream 178935 30526440 ~ 30532235 (-)
G2270673 LOC106611749 non-coding downstream 54660 30283733 ~ 30319917 (-)
G2270681 NA non-coding downstream 57688 30283225 ~ 30283439 (-)
G2270377 NA non-coding downstream 127978 30212870 ~ 30213149 (-)
G2270311 LOC106611743 non-coding downstream 202887 30136554 ~ 30138240 (-)
G2270308 NA non-coding downstream 225759 30115163 ~ 30115368 (-)
G2270793 NA non-coding upstream 80001 30427506 ~ 30427708 (-)
G2270807 NA non-coding upstream 104049 30451554 ~ 30452154 (-)
G2270799 NA non-coding upstream 146510 30494015 ~ 30494576 (-)
G2270769 LOC106611761 non-coding upstream 169546 30517051 ~ 30524441 (-)
G2270840 NA non-coding upstream 192238 30539743 ~ 30540090 (-)
G2270186 NA other downstream 268998 30070378 ~ 30072129 (-)
G2269291 NA other downstream 1705828 28634930 ~ 28635299 (-)
G2269277 NA other downstream 1734339 28606400 ~ 28606788 (-)
LOC110504930 LOC106611712 other downstream 2006174 28328943 ~ 28358459 (-)
LOC110504988 LOC106515624 other upstream 220864 30566629 ~ 30575299 (-)
LOC110505004 LOC102314576 other upstream 824743 31172148 ~ 31175109 (-)
G2272324 NA other upstream 1905878 32253383 ~ 32253938 (-)
LOC110505054 LOC106611652 other upstream 2964411 33308270 ~ 33313952 (-)
LOC110505064 LOC106611642 other upstream 3351080 33693783 ~ 33765421 (-)

Expression


Co-expression Network