trnaa-agc-12


Basic Information

Item Value
gene id trnaa-agc-12
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30653971 ~ 30654043 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-agc-12
gggggattagctcaaatggtagagcgctcgcttagcatgcgagaggtagcgggatcgatgcccgcatcctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-agc-12 True 73 mRNA 0.58 1 30653971 30654043

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-11 NA coding upstream 1220 30652167 ~ 30706266 (+)
LOC110504990 LOC106611765 coding upstream 42723 30600029 ~ 30611248 (+)
LOC110504986 LOC106611761 coding upstream 129531 30517331 ~ 30524440 (+)
LOC110504985 LOC106611760 coding upstream 137588 30502069 ~ 30516383 (+)
LOC110504984 LOC106604710 coding upstream 153812 30496632 ~ 30500159 (+)
trnaa-agc-13 NA coding downstream 240 30654283 ~ 30654355 (+)
trnaa-agc-14 NA coding downstream 2345 30656388 ~ 30656460 (+)
trnaa-agc-15 NA coding downstream 4431 30658474 ~ 30658546 (+)
trnaa-agc-16 NA coding downstream 6833 30660876 ~ 30660948 (+)
trnaa-agc-17 NA coding downstream 7457 30661500 ~ 30661572 (+)
G2270601 NA non-coding upstream 15234 30635516 ~ 30638737 (+)
G2270600 NA non-coding upstream 19200 30634503 ~ 30634771 (+)
G2270598 NA non-coding upstream 22605 30630994 ~ 30631366 (+)
G2270597 NA non-coding upstream 24001 30629695 ~ 30629970 (+)
trnaa-agc-199 NA non-coding downstream 295653 30949696 ~ 30950464 (+)
G2270914 NA non-coding downstream 296406 30950449 ~ 30950994 (+)
G2270916 NA non-coding downstream 297458 30951501 ~ 30951752 (+)
G2270921 NA non-coding downstream 312267 30966310 ~ 30966549 (+)
G2270922 NA non-coding downstream 313799 30967842 ~ 30968222 (+)
G2268400 LOC106611722 other upstream 1755892 28896755 ~ 28898079 (+)
G2268340 NA other upstream 1886242 28766877 ~ 28767729 (+)
G2266826 NA other upstream 3718082 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 4033023 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 4281488 26298775 ~ 26483992 (+)
G2271027 NA other downstream 522847 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 2209393 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 2762047 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3548040 34202011 ~ 34207415 (+)
G2274048 NA other downstream 3577952 34231995 ~ 34232604 (+)

Expression


Co-expression Network