trnaa-agc-16


Basic Information

Item Value
gene id trnaa-agc-16
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30660876 ~ 30660948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-agc-16
gggggattagctcaaatggtagagtgctcgcttagcatgcgagaggtagcgggatcgatgcccgcatcctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-agc-16 True 73 mRNA 0.59 1 30660876 30660948

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-15 NA coding upstream 2330 30658474 ~ 30658546 (+)
trnaa-agc-14 NA coding upstream 4416 30656388 ~ 30656460 (+)
trnaa-agc-13 NA coding upstream 6521 30654283 ~ 30654355 (+)
trnaa-agc-12 NA coding upstream 6833 30653971 ~ 30654043 (+)
trnaa-agc-11 NA coding upstream 8125 30652167 ~ 30706266 (+)
trnaa-agc-17 NA coding downstream 552 30661500 ~ 30661572 (+)
trnaa-agc-18 NA coding downstream 864 30661812 ~ 30661884 (+)
trnaa-agc-19 NA coding downstream 3592 30664540 ~ 30664612 (+)
trnaa-agc-20 NA coding downstream 6006 30666954 ~ 30667026 (+)
trnaa-agc-21 NA coding downstream 8420 30669368 ~ 30669440 (+)
G2270601 NA non-coding upstream 22139 30635516 ~ 30638737 (+)
G2270600 NA non-coding upstream 26105 30634503 ~ 30634771 (+)
G2270598 NA non-coding upstream 29510 30630994 ~ 30631366 (+)
G2270597 NA non-coding upstream 30906 30629695 ~ 30629970 (+)
LOC110504990 LOC106611765 non-coding upstream 52514 30600029 ~ 30611248 (+)
trnaa-agc-199 NA non-coding downstream 288748 30949696 ~ 30950464 (+)
G2270914 NA non-coding downstream 289501 30950449 ~ 30950994 (+)
G2270916 NA non-coding downstream 290553 30951501 ~ 30951752 (+)
G2270921 NA non-coding downstream 305362 30966310 ~ 30966549 (+)
G2270922 NA non-coding downstream 306894 30967842 ~ 30968222 (+)
G2268400 LOC106611722 other upstream 1762797 28896755 ~ 28898079 (+)
G2268340 NA other upstream 1893147 28766877 ~ 28767729 (+)
G2266826 NA other upstream 3724987 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 4039928 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 4288393 26298775 ~ 26483992 (+)
G2271027 NA other downstream 515942 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 2202488 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 2755142 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3541135 34202011 ~ 34207415 (+)
G2274048 NA other downstream 3571047 34231995 ~ 34232604 (+)

Expression


Co-expression Network