trnaa-agc-199


Basic Information

Item Value
gene id trnaa-agc-199
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30949696 ~ 30950464 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-agc-199
gggggattggctcaaatggtagagcgctcgcttagcatgcgagaggtagcgggatcgatgcccgcatcctcca
>TU2597672
gtagaaaggccttggagcgatccactgagacgcagtgagcataagcacgacaaaagacaggaaaacagtgaccatgtttcgggcgactaacatgcatttccccacgatcaactgatcctaatgttattccacagacagccagcagggggtactccagactcgcaggtttttctgctatcatacacccaaaactcactaacccaacaatacaactatttccaccactgggcttactgcagtcactacttccacctttactgaactaccatgaaaaatacttttagacagctgaagcaagcatactttttaaaaagtatccttacttatggacgagggatttggcagtgtggtcattgagatttcatacttcttgttggatgcacagggggattagctcaaatggtagagcgctcgcttagcatgcgagaggtagcgggatcgatgcccacATCCTCCAACtacttagtttggttcaatcagcacacattgttgttgtagctctggatactaacccaacaatacaactatttccaccactgggcttactcctataactacttcaacctttactgaactaccatgaaaaatacttttagacagctgaagcaagcatacttgttaaaaagtatcctttcttatggacgaggaatttggcagtgcggtcattgagatttcatacttcttgttggaggcacagggggattggctcaaatggtagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-agc-199 False 73 mRNA 0.60 1 30950392 30950464
TU2597672 True 720 lncRNA 0.44 1 30949696 30950415

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-198 NA coding upstream 2375 30947945 ~ 30948017 (+)
trnaa-agc-197 NA coding upstream 4772 30945548 ~ 30945620 (+)
trnaa-agc-196 NA coding upstream 5084 30945236 ~ 30945308 (+)
trnaa-ugc-208 NA coding upstream 8428 30941892 ~ 30941964 (+)
trnaa-ugc-207 NA coding upstream 8740 30941580 ~ 30941652 (+)
trnaa-agc-200 NA coding downstream 232 30950696 ~ 30950768 (+)
trnaa-agc-201 NA coding downstream 2331 30952795 ~ 30952867 (+)
trnaa-agc-202 NA coding downstream 2643 30953107 ~ 30953179 (+)
trnaa-agc-203 NA coding downstream 2947 30953411 ~ 30953483 (+)
trnaa-agc-204 NA coding downstream 5043 30955507 ~ 30955579 (+)
trnaa-agc-11 NA non-coding upstream 244126 30652167 ~ 30706266 (+)
G2270601 NA non-coding upstream 311655 30635516 ~ 30638737 (+)
G2270600 NA non-coding upstream 315621 30634503 ~ 30634771 (+)
G2270598 NA non-coding upstream 319026 30630994 ~ 30631366 (+)
G2270597 NA non-coding upstream 320422 30629695 ~ 30629970 (+)
G2270916 NA non-coding downstream 1037 30951501 ~ 30951752 (+)
G2270921 NA non-coding downstream 15846 30966310 ~ 30966549 (+)
G2270922 NA non-coding downstream 17378 30967842 ~ 30968222 (+)
G2270925 NA non-coding downstream 25479 30975943 ~ 30976412 (+)
G2270926 NA non-coding downstream 26699 30977163 ~ 30977377 (+)
G2268400 LOC106611722 other upstream 2052313 28896755 ~ 28898079 (+)
G2268340 NA other upstream 2182663 28766877 ~ 28767729 (+)
G2266826 NA other upstream 4014503 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 4329444 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 4577909 26298775 ~ 26483992 (+)
G2271027 NA other downstream 226426 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 1912972 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 2465626 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3251619 34202011 ~ 34207415 (+)
G2274048 NA other downstream 3281531 34231995 ~ 34232604 (+)
G2270914 NA non-coding downstream 34 30950449 ~ 30950994 (+)

Expression


Co-expression Network