Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110505012 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 31249429 ~ 31251347 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: nocturnin-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021583945.2 | True | 1919 | mRNA | 0.50 | 1 | 31249429 | 31251347 |
31,247,600
31,248,000
31,248,400
31,248,800
31,249,200
31,249,600
31,250,000
31,250,400
31,250,800
31,251,200
31,251,600
31,252,000
31,252,400
31,252,800
31,253,200
31,253,600
31,254,000
31,254,400
31,254,800
31,255,200
NC_050571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505005 | naa15 | coding | downstream | 43178 | 31193702 ~ 31206251 (-) |
| LOC118946086 | NA | coding | downstream | 54051 | 31195244 ~ 31195378 (-) |
| LOC110505008 | LOC106611777 | coding | downstream | 63243 | 31183225 ~ 31186186 (-) |
| LOC110505004 | LOC102314576 | coding | downstream | 74320 | 31172148 ~ 31175109 (-) |
| hars | LOC106611772 | coding | downstream | 126598 | 31118101 ~ 31122831 (-) |
| LOC110505016 | pcdh10 | coding | upstream | 874949 | 32126296 ~ 32138798 (-) |
| LOC110505017 | LOC106611785 | coding | upstream | 1255666 | 32507013 ~ 32509252 (-) |
| LOC110505019 | LOC106611786 | coding | upstream | 1286401 | 32537748 ~ 32614415 (-) |
| chrnb3a | LOC106611787 | coding | upstream | 1367272 | 32618619 ~ 32629538 (-) |
| LOC110505020 | LOC106611788 | coding | upstream | 1396923 | 32648270 ~ 32671869 (-) |
| G2271167 | NA | non-coding | downstream | 5355 | 31243626 ~ 31244074 (-) |
| G2271161 | NA | non-coding | downstream | 11853 | 31237126 ~ 31237576 (-) |
| G2271190 | NA | non-coding | downstream | 38811 | 31209805 ~ 31210618 (-) |
| G2271189 | NA | non-coding | downstream | 40304 | 31208923 ~ 31209125 (-) |
| G2271175 | ndufc1 | non-coding | downstream | 41290 | 31206512 ~ 31208139 (-) |
| G2271209 | NA | non-coding | upstream | 13172 | 31264519 ~ 31264789 (-) |
| G2271214 | NA | non-coding | upstream | 21359 | 31272706 ~ 31272931 (-) |
| G2271218 | NA | non-coding | upstream | 26907 | 31278254 ~ 31279029 (-) |
| G2271250 | NA | non-coding | upstream | 71493 | 31322840 ~ 31324679 (-) |
| G2271335 | NA | non-coding | upstream | 162920 | 31414267 ~ 31415492 (-) |
| LOC110504988 | LOC106515624 | other | downstream | 674159 | 30566629 ~ 30575299 (-) |
| G2270673 | LOC106611749 | other | downstream | 929512 | 30283733 ~ 30319917 (-) |
| G2270186 | NA | other | downstream | 1177300 | 30070378 ~ 30072129 (-) |
| G2269291 | NA | other | downstream | 2614130 | 28634930 ~ 28635299 (-) |
| G2272324 | NA | other | upstream | 1002036 | 32253383 ~ 32253938 (-) |
| LOC110505054 | LOC106611652 | other | upstream | 2060569 | 33308270 ~ 33313952 (-) |
| LOC110505064 | LOC106611642 | other | upstream | 2447238 | 33693783 ~ 33765421 (-) |
| LOC110505071 | LOC106611637 | other | upstream | 2815348 | 34008192 ~ 34106811 (-) |
| G2275717 | NA | other | upstream | 3900571 | 35151918 ~ 35152583 (-) |
