Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110505020 |
| gene name | LOC106611788 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 32648270 ~ 32671869 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neuronal acetylcholine receptor subunit alpha-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021583957.2 | False | 4530 | mRNA | 0.46 | 7 | 32648270 | 32671869 |
| TU2599693 | True | 2306 | lncRNA | 0.43 | 2 | 32648769 | 32656472 |
32,640,000
32,644,000
32,648,000
32,652,000
32,656,000
32,660,000
32,664,000
32,664,000
32,668,000
32,672,000
32,676,000
32,680,000
32,684,000
32,688,000
NC_050571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| chrnb3a | LOC106611787 | coding | downstream | 18732 | 32618619 ~ 32629538 (-) |
| LOC110505019 | LOC106611786 | coding | downstream | 33855 | 32537748 ~ 32614415 (-) |
| LOC110505017 | LOC106611785 | coding | downstream | 139018 | 32507013 ~ 32509252 (-) |
| LOC110505016 | pcdh10 | coding | downstream | 509472 | 32126296 ~ 32138798 (-) |
| LOC110505012 | NA | coding | downstream | 1396923 | 31249429 ~ 31251347 (-) |
| LOC110505023 | LOC106611789 | coding | upstream | 15408 | 32687277 ~ 32711042 (-) |
| LOC110504155 | LOC106611790 | coding | upstream | 147695 | 32819564 ~ 32840207 (-) |
| LOC110505024 | LOC106611791 | coding | upstream | 168653 | 32840522 ~ 32846663 (-) |
| LOC110505026 | LOC106611792 | coding | upstream | 183964 | 32855833 ~ 32867907 (-) |
| LOC110505025 | LOC106611679 | coding | upstream | 196171 | 32868040 ~ 32884937 (-) |
| G2272768 | NA | non-coding | downstream | 26292 | 32621747 ~ 32621978 (-) |
| G2272681 | NA | non-coding | downstream | 114403 | 32533298 ~ 32533867 (-) |
| G2272633 | NA | non-coding | downstream | 154374 | 32405133 ~ 32493896 (-) |
| G2272601 | NA | non-coding | downstream | 224284 | 32367965 ~ 32423986 (-) |
| G2272816 | NA | non-coding | upstream | 2521 | 32674390 ~ 32674605 (-) |
| G2272822 | NA | non-coding | upstream | 9565 | 32681434 ~ 32681636 (-) |
| G2272824 | NA | non-coding | upstream | 10712 | 32682581 ~ 32682796 (-) |
| G2272828 | NA | non-coding | upstream | 12135 | 32684004 ~ 32684583 (-) |
| G2272324 | NA | other | downstream | 394332 | 32253383 ~ 32253938 (-) |
| LOC110505004 | LOC102314576 | other | downstream | 1473219 | 31172148 ~ 31175109 (-) |
| LOC110504988 | LOC106515624 | other | downstream | 2073000 | 30566629 ~ 30575299 (-) |
| G2270673 | LOC106611749 | other | downstream | 2328353 | 30283733 ~ 30319917 (-) |
| G2270186 | NA | other | downstream | 2576141 | 30070378 ~ 30072129 (-) |
| LOC110505054 | LOC106611652 | other | upstream | 640047 | 33308270 ~ 33313952 (-) |
| LOC110505064 | LOC106611642 | other | upstream | 1026716 | 33693783 ~ 33765421 (-) |
| LOC110505071 | LOC106611637 | other | upstream | 1394826 | 34008192 ~ 34106811 (-) |
| G2275717 | NA | other | upstream | 2480049 | 35151918 ~ 35152583 (-) |
| LOC110505098 | LOC106611615 | other | upstream | 2921556 | 35593425 ~ 35600758 (-) |
