Item | Value |
---|---|
gene id | LOC110505152 |
gene name | LOC106611539 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_050571.1 |
NCBI id | CM025858.1 |
chromosome length | 44108611 |
location | 39959022 ~ 40114451 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036970371.1 | False | 6650 | mRNA | 0.52 | 25 | 39959081 | 40017288 |
XM_036970369.1 | False | 6641 | mRNA | 0.52 | 27 | 39959081 | 40027868 |
XM_036970370.1 | False | 6768 | mRNA | 0.52 | 27 | 39959081 | 40027868 |
XM_021584163.2 | False | 6732 | mRNA | 0.52 | 29 | 39959081 | 40114451 |
XM_021584170.2 | False | 6405 | mRNA | 0.52 | 28 | 39959081 | 40114451 |
XM_021584171.2 | False | 6306 | mRNA | 0.51 | 28 | 39959081 | 40114451 |
XM_021584172.2 | False | 6267 | mRNA | 0.51 | 27 | 39959081 | 40114451 |
XM_021584175.2 | False | 5979 | mRNA | 0.51 | 27 | 39959081 | 40114451 |
XM_021584176.2 | False | 5940 | mRNA | 0.51 | 26 | 39959081 | 40114451 |
XM_036970363.1 | False | 6729 | mRNA | 0.52 | 29 | 39959081 | 40114451 |
XM_036970364.1 | False | 6651 | mRNA | 0.52 | 28 | 39959081 | 40114451 |
XM_036970365.1 | False | 6609 | mRNA | 0.52 | 28 | 39959081 | 40114451 |
XM_036970366.1 | False | 6528 | mRNA | 0.52 | 27 | 39959081 | 40114451 |
XM_036970367.1 | False | 6477 | mRNA | 0.52 | 29 | 39959081 | 40114451 |
XM_036970368.1 | False | 6408 | mRNA | 0.52 | 28 | 39959081 | 40114451 |
TU2609704 | False | 3262 | TUCP | 0.40 | 4 | 39959022 | 39963760 |
TU2609677 | True | 2565 | lncRNA | 0.40 | 3 | 39959100 | 39962523 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110505150 | LOC106611544 | coding | downstream | 52242 | 39898790 ~ 39906839 (-) |
LOC110504164 | bbs7 | coding | downstream | 62001 | 39872235 ~ 39897080 (-) |
LOC110505149 | NA | coding | downstream | 66092 | 39892357 ~ 39892989 (-) |
LOC110505148 | LOC106611545 | coding | downstream | 88628 | 39865326 ~ 39870453 (-) |
LOC110504163 | LOC106611563 | coding | downstream | 111834 | 39830014 ~ 39847247 (-) |
LOC118946039 | NA | coding | upstream | 415100 | 40529551 ~ 40530348 (-) |
LOC110505155 | LOC106611536 | coding | upstream | 442665 | 40557116 ~ 40571228 (-) |
LOC110505157 | LOC106611535 | coding | upstream | 460193 | 40574644 ~ 40578966 (-) |
LOC110505158 | LOC106611534 | coding | upstream | 479113 | 40593564 ~ 40597276 (-) |
LOC110505159 | LOC106611533 | coding | upstream | 490786 | 40605237 ~ 40680370 (-) |
G2281912 | NA | non-coding | downstream | 13629 | 39945080 ~ 39945452 (-) |
G2281905 | NA | non-coding | downstream | 19328 | 39939541 ~ 39939753 (-) |
G2281901 | NA | non-coding | downstream | 23641 | 39935192 ~ 39935440 (-) |
G2281899 | NA | non-coding | downstream | 24137 | 39934658 ~ 39934944 (-) |
G2281895 | NA | non-coding | downstream | 26564 | 39932281 ~ 39932517 (-) |
G2282278 | NA | non-coding | upstream | 78783 | 40193234 ~ 40197252 (-) |
G2282713 | NA | non-coding | upstream | 142267 | 40256718 ~ 40256922 (-) |
G2282716 | NA | non-coding | upstream | 144326 | 40258777 ~ 40258989 (-) |
G2282723 | NA | non-coding | upstream | 153637 | 40268088 ~ 40268312 (-) |
G2282726 | NA | non-coding | upstream | 160034 | 40274485 ~ 40274689 (-) |
G2279888 | NA | other | downstream | 1816408 | 38141857 ~ 38142673 (-) |
G2279830 | LOC106611580 | other | downstream | 1859555 | 38094416 ~ 38099549 (-) |
LOC110505113 | LOC106604562 | other | downstream | 3023400 | 36529308 ~ 36935859 (-) |
G2277202 | NA | other | downstream | 3672037 | 36248235 ~ 36287044 (-) |
LOC110505098 | LOC106611615 | other | downstream | 4361867 | 35593425 ~ 35600758 (-) |
G2283492 | NA | other | upstream | 856675 | 40971126 ~ 40975247 (-) |
G2286385 | NA | other | upstream | 3174243 | 43288694 ~ 43289259 (-) |
G2286378 | NA | other | upstream | 3228572 | 43343023 ~ 43345098 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | G335312 | NA | non-coding | CI01000116 | null | 664276 ~ 665866 (-) |