G2244732


Basic Information

Item Value
gene id G2244732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 3964668 ~ 3967188 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2566875
AGTTACTGTACTTACTGTAATACACTCCCtgtttgtgttccaaatggcacaccctattccttatatagtgcactcatttgtatgggctctggtaaaaaaaacactagtgcactataaatgaaATAGGGAGTCCCTTCGGGACACAGCCCCATATTGCACTAGTCACTATAAAAACTGTCGGACACTCCATATTGACCCCAGGGACCCAGAATGCATCACTTCACATCAGCTATGTTATTAATTGAGTAATGTAAATCAGAATAGTACACCATAAAGGAGTAGTGTTTTGAAGCAACACTATCAATGTACAGGAGATGGAAATAAACGCTGTTTACAGGGCTGGGAGTCAAATCCAGGTTAAACAGTGGCTCTTGAATGGAGAATAATCTCATAGCCAATTATATTCTAGAATGTTCTAAATTCagttggaattgaccccaactctgTGAAGGGATTTGTAGTCGTTTTGTTGTCCTGGGATTTGTAGTCATTGTGTTGACTTGGGATTGGTAGTCATTGTGTTGTCCTGGGATTTGTAGTCATTGTGTTGTCCTGGGATTTGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGATAGTCATTGTGTTGTCTTGGGATTTGTAGTCCATCGTGTTGTCCTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGGTAGTCATTGTGTTGTCTTGGGATTGATAGTCATTGTGTTGTCTTGGGATTTGTAGTCCATCGTGTTGTCCTGGGATTGGTAGTCATTGTGTTGTCCTGGGATTTGTAGTCCATTGTGTTGTCCTGGGATTTGTAGTCCATTGTGTTGTCCTGGGATTTGTAGTCCATTGTGTTGTCCTGGGATTTGTAGTCCATTGTGTTGTCCTGGGATTTGTAGTCCATTGTGTTGTCCTGGGATTTGTAGTCCATTGTGTTGTCCTGGGATTGGTAGTCATTCTACACAAGTGACTGTCTGTATTAGACCAAATACTTTATGGTCTAGGGTTCTATCCAATCCGAATCCCAGAAGTGCAGCGTGATTGTTCCCGCGTGGGCGGAGACTGCATTCCTGGTAAATGATGTCGGCTCAATCCACAAATTTACATTCAGAGCGCGCAATCTGTATAATGTCAAACGACACATTGAATAGAGCTCATGTCTCACAAGAGACCTGTAAgtaagtacactgaacaaaaatataaatggtttaatatactgaacaaaaatataaacgcaacaattttaaagattttactgaattccagttcatagaaggaaatcagtcaattgaaataaattcattaggccctaatctatggattacacaggactgggcaggggcacagccttctttgggcctgggagggcataggcccacccactggggagccagtcccagccacaaaagggctttatttaaGACatatactcctcagtttcatcagctgtcagggtggatggtctcAGACgttcctgcaggtgaagaagccggatgtggaggtcctgggctggttggttggacgtactgccaaattctctaaaacgacgttggaggcggcttatggtagagaaattaacattcaattctctggcaacagctctggtggacgttcctgcagtcaacatgccaaatACACGCTCCATTGTGTTGTGGGACGAAActgcattttagagtggccttttattttccccagcacaaggtgcacctgtgtaatgatcatgcggtTTTAagtagcttcttgatatgccacatctggtcaggtggatggattatctcggcattggagaaatgctcactaaaaaaaggggatgtaaacaaatttgtgcacaaaatttgaaagAGATACgctttttttgtgcgtatggaacattttctgggatattttatttcaactcatgaaacctgggacactttacatgttacgttcatattttttgttcagtatatttatttAATGGGTGTGTTTTGAAAGGACTGTGTGTTTTGAAACCTAATTATTTTGTAATGTACTGTGTTCGCTGACTAGGGAGATTTTGGTTCACTTCTGATATGTACTCATTCCTCCAACCTCCAGCTCCAAGAAGGATTTATAATAACAGAATACTAACAAATATAATCTGTATTTTACTATTTGTTTTATATTAAAGTATCGTATACCAAGTGCCTTCTCAAGCTTTAAACACTGAGCTTTAAAATAATTCTTAAATTCTAACGAAAAACTGCTGTATTCATTTGTGTACAGGCTAGAGATGTTTTTAGCGAAATAATTGATATCTTTGATCGAGGAGCTGTATTTGGTATCAGAACCAGTCAATCAATAAAAC

Function

NR:

description
hypothetical protein EH28_03751

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2566875 True 2492 lncRNA 0.40 2 3964668 3967188

Neighbor

gene id symbol gene type direction distance location
LOC118945987 NA coding downstream 408109 3554190 ~ 3556559 (-)
LOC110504452 LOC106592046 coding downstream 1222994 2713388 ~ 2741674 (-)
LOC110504350 LOC106612322 coding downstream 1343496 2587898 ~ 2621172 (-)
si:ch211-274f20.2 LOC106612323 coding downstream 1379471 2575623 ~ 2585197 (-)
lpar4 LOC106612318 coding downstream 1594073 2361115 ~ 2370595 (-)
LOC118946073 NA coding upstream 446 3967634 ~ 3968806 (-)
LOC110489654 LOC104930052 coding upstream 1728 3968916 ~ 4058166 (-)
higd2a LOC106612309 coding upstream 131579 4098767 ~ 4100716 (-)
LOC110504518 LOC106612310 coding upstream 163466 4130654 ~ 4199943 (-)
LOC110513918 syub coding upstream 268981 4236169 ~ 4290491 (-)
G2244776 NA non-coding downstream 8033 3953775 ~ 3956635 (-)
G2244724 NA non-coding downstream 126333 3835718 ~ 3838335 (-)
G2244505 NA non-coding downstream 172205 3792263 ~ 3792463 (-)
G2244497 NA non-coding downstream 182939 3781482 ~ 3781729 (-)
G2244476 NA non-coding downstream 208404 3756037 ~ 3756264 (-)
G2244779 NA non-coding upstream 13853 3981041 ~ 3984963 (-)
G2244809 NA non-coding upstream 105115 4072303 ~ 4072653 (-)
G2244814 NA non-coding upstream 108924 4076112 ~ 4076553 (-)
G2244810 NA non-coding upstream 127622 4094810 ~ 4119344 (-)
G2244826 LOC106612308 non-coding upstream 138455 4105643 ~ 4110239 (-)
G2243801 NA other downstream 1027126 2936604 ~ 2937542 (-)
G2243777 NA other downstream 1077209 2885291 ~ 2887459 (-)
G2242632 NA other downstream 2570953 1390378 ~ 1393715 (-)
G2242341 LOC106604099 other downstream 3005006 936604 ~ 959662 (-)
G2244811 NA other upstream 144514 4111702 ~ 4113001 (-)
G2245152 ctnna1 other upstream 568653 4535841 ~ 4621990 (-)
G2246314 NA other upstream 1880931 5848119 ~ 5852599 (-)
G2247416 NA other upstream 2903399 6870587 ~ 6871100 (-)

Expression


Co-expression Network