G2244811


Basic Information

Item Value
gene id G2244811
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 4111702 ~ 4113001 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2566964
tccaggaccagagagacagacgtcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcactacatctccaggaccagagacagacctcacaacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGagacgtcaccacatctccaggaccagagacagaCGTATGGGagacgtcaccacatctccaggaccagagacagaCGTATGGGAGAccacaccacatctccaggaccagagacagaCaCGTATGGGAGAccacaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagGCGTATGGGAGAcctcaccacatctccaggaccagagacagGCGTATGGGagacgtcaccacatctccaggaccagagacagaCGTATGGGAGActtcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagacgtcaccacatctccaggaccagagacagacgtcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacgtcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggactaGACAGACGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCCTCACCACATCTCTAGGACCAGAGACAGAcctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagacgtc
>TU2566965
tccaggaccagagagacagacgtcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcactacatctccaggaccagagacagacctcacaacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGagacgtcaccacatctccaggaccagagacagaCGTATGGGagacgtcaccacatctccaggaccagagacagaCGTATGGGAGAccacaccacatctccaggaccagagacagaCaCGTATGGGAGAccacaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagGCGTATGGGAGAcctcaccacatctccaggaccagagacagGCGTATGGGagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggactaGACAGACGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCCTCACCACATCTCTAGGACCAGAGACAGAcctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagacgtc
>TU2566966
tccaggaccagagagacagacgtcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagacctcactacatctccaggaccagagacagacctcacaacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGagacgtcaccacatctccaggaccagagacagaCGTATGGGagacgtcaccacatctccaggaccagagacagaCGTATGGGAGAccacaccacatctccaggaccagagacagaCaCGTATGGGAGAccacaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagGCGTATGGGAGAcctcaccacatctccaggaccagagacagACGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCCTCACCACATCTCTAGGACCAGAGACAGAcctcaccacatctccaggaccagagacagacctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagaCGTATGGGAGAcctcaccacatctccaggaccagagacagacgtc

Function

NR:

description
LWamide neuropeptide

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2566964 False 1261 TUCP 0.56 2 4111702 4113001
TU2566965 False 1029 TUCP 0.56 3 4111702 4113001
TU2566966 True 930 TUCP 0.56 3 4111702 4113001

Neighbor

gene id symbol gene type direction distance location
higd2a LOC106612309 coding downstream 10986 4098767 ~ 4100716 (-)
LOC110489654 LOC104930052 coding downstream 53536 3968916 ~ 4058166 (-)
LOC118946073 NA coding downstream 142896 3967634 ~ 3968806 (-)
LOC118945987 NA coding downstream 555143 3554190 ~ 3556559 (-)
LOC110504452 LOC106592046 coding downstream 1370028 2713388 ~ 2741674 (-)
LOC110504518 LOC106612310 coding upstream 17653 4130654 ~ 4199943 (-)
LOC110513918 syub coding upstream 123168 4236169 ~ 4290491 (-)
LOC110504469 LOC106612313 coding upstream 476432 4589433 ~ 4594305 (-)
LOC118945992 NA coding upstream 674438 4787439 ~ 4788320 (-)
LOC110504358 LOC106604155 coding upstream 1375728 5488729 ~ 5526792 (-)
G2244826 LOC106612308 non-coding downstream 1463 4105643 ~ 4110239 (-)
G2244814 NA non-coding downstream 35149 4076112 ~ 4076553 (-)
G2244809 NA non-coding downstream 39049 4072303 ~ 4072653 (-)
G2244779 NA non-coding downstream 126739 3981041 ~ 3984963 (-)
G2244732 NA non-coding downstream 144514 3964668 ~ 3967188 (-)
G2244828 NA non-coding upstream 7381 4120382 ~ 4136225 (-)
G2244841 NA non-coding upstream 40453 4153454 ~ 4176483 (-)
G2244850 NA non-coding upstream 63531 4176532 ~ 4177446 (-)
G2244864 NA non-coding upstream 81543 4194544 ~ 4195508 (-)
G2244867 NA non-coding upstream 89175 4202176 ~ 4202382 (-)
G2243801 NA other downstream 1174160 2936604 ~ 2937542 (-)
G2243777 NA other downstream 1224243 2885291 ~ 2887459 (-)
si:ch211-274f20.2 LOC106612323 other downstream 1526516 2575623 ~ 2585197 (-)
G2242632 NA other downstream 2717987 1390378 ~ 1393715 (-)
G2245152 ctnna1 other upstream 422840 4535841 ~ 4621990 (-)
G2246314 NA other upstream 1735118 5848119 ~ 5852599 (-)
G2247416 NA other upstream 2757586 6870587 ~ 6871100 (-)
G2247565 NA other upstream 2825622 6938623 ~ 7024539 (-)
G2247813 NA other upstream 3142343 7255344 ~ 7255940 (-)

Expression


Co-expression Network