Gene
RNA
| Item | Value |
|---|---|
| gene id | G2244864 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 4194544 ~ 4195508 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2567034 | False | 314 | lncRNA | 0.50 | 2 | 4194544 | 4195329 |
| TU2567035 | True | 355 | lncRNA | 0.50 | 2 | 4194544 | 4195508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| higd2a | LOC106612309 | coding | downstream | 93828 | 4098767 ~ 4100716 (-) |
| LOC110489654 | LOC104930052 | coding | downstream | 136378 | 3968916 ~ 4058166 (-) |
| LOC118946073 | NA | coding | downstream | 225738 | 3967634 ~ 3968806 (-) |
| LOC118945987 | NA | coding | downstream | 637985 | 3554190 ~ 3556559 (-) |
| LOC110504452 | LOC106592046 | coding | downstream | 1452870 | 2713388 ~ 2741674 (-) |
| LOC110513918 | syub | coding | upstream | 40661 | 4236169 ~ 4290491 (-) |
| LOC110504469 | LOC106612313 | coding | upstream | 393925 | 4589433 ~ 4594305 (-) |
| LOC118945992 | NA | coding | upstream | 591931 | 4787439 ~ 4788320 (-) |
| LOC110504358 | LOC106604155 | coding | upstream | 1293221 | 5488729 ~ 5526792 (-) |
| LOC110504491 | LOC106604157 | coding | upstream | 1337351 | 5532859 ~ 5604780 (-) |
| G2244850 | NA | non-coding | downstream | 17098 | 4176532 ~ 4177446 (-) |
| G2244841 | NA | non-coding | downstream | 18061 | 4153454 ~ 4176483 (-) |
| G2244828 | NA | non-coding | downstream | 58319 | 4120382 ~ 4136225 (-) |
| G2244810 | NA | non-coding | downstream | 75200 | 4094810 ~ 4119344 (-) |
| G2244867 | NA | non-coding | upstream | 6668 | 4202176 ~ 4202382 (-) |
| G2244875 | NA | non-coding | upstream | 33581 | 4229089 ~ 4229298 (-) |
| G2244877 | NA | non-coding | upstream | 36009 | 4231517 ~ 4231751 (-) |
| G2244878 | NA | non-coding | upstream | 37937 | 4233445 ~ 4235329 (-) |
| G2244899 | NA | non-coding | upstream | 90994 | 4286502 ~ 4286734 (-) |
| G2244811 | NA | other | downstream | 81543 | 4111702 ~ 4113001 (-) |
| G2243801 | NA | other | downstream | 1257002 | 2936604 ~ 2937542 (-) |
| G2243777 | NA | other | downstream | 1307085 | 2885291 ~ 2887459 (-) |
| si:ch211-274f20.2 | LOC106612323 | other | downstream | 1609358 | 2575623 ~ 2585197 (-) |
| G2245152 | ctnna1 | other | upstream | 340333 | 4535841 ~ 4621990 (-) |
| G2246314 | NA | other | upstream | 1652611 | 5848119 ~ 5852599 (-) |
| G2247416 | NA | other | upstream | 2675079 | 6870587 ~ 6871100 (-) |
| G2247565 | NA | other | upstream | 2743115 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 3059836 | 7255344 ~ 7255940 (-) |
