Gene
RNA
| Item | Value |
|---|---|
| gene id | G2244987 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 4377539 ~ 4377821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2567176 | True | 283 | lncRNA | 0.42 | 1 | 4377539 | 4377821 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513918 | syub | coding | downstream | 87048 | 4236169 ~ 4290491 (-) |
| LOC110504518 | LOC106612310 | coding | downstream | 177596 | 4130654 ~ 4199943 (-) |
| higd2a | LOC106612309 | coding | downstream | 276823 | 4098767 ~ 4100716 (-) |
| LOC110489654 | LOC104930052 | coding | downstream | 319373 | 3968916 ~ 4058166 (-) |
| LOC118946073 | NA | coding | downstream | 408733 | 3967634 ~ 3968806 (-) |
| LOC110504469 | LOC106612313 | coding | upstream | 211612 | 4589433 ~ 4594305 (-) |
| LOC118945992 | NA | coding | upstream | 409618 | 4787439 ~ 4788320 (-) |
| LOC110504358 | LOC106604155 | coding | upstream | 1110908 | 5488729 ~ 5526792 (-) |
| LOC110504491 | LOC106604157 | coding | upstream | 1155038 | 5532859 ~ 5604780 (-) |
| LOC110504359 | LOC106612272 | coding | upstream | 1329597 | 5707418 ~ 5731006 (-) |
| G2244954 | NA | non-coding | downstream | 41759 | 4333633 ~ 4335780 (-) |
| G2244952 | NA | non-coding | downstream | 44147 | 4333187 ~ 4333392 (-) |
| G2244948 | NA | non-coding | downstream | 45988 | 4331181 ~ 4331551 (-) |
| G2244946 | NA | non-coding | downstream | 47080 | 4330132 ~ 4330459 (-) |
| G2244942 | NA | non-coding | downstream | 52061 | 4325279 ~ 4325478 (-) |
| G2244996 | NA | non-coding | upstream | 6755 | 4384576 ~ 4384972 (-) |
| G2245000 | NA | non-coding | upstream | 12190 | 4390011 ~ 4390946 (-) |
| G2245008 | NA | non-coding | upstream | 17712 | 4395533 ~ 4395782 (-) |
| G2245011 | NA | non-coding | upstream | 19360 | 4397181 ~ 4398253 (-) |
| G2245014 | NA | non-coding | upstream | 30929 | 4408750 ~ 4409013 (-) |
| G2244811 | NA | other | downstream | 264538 | 4111702 ~ 4113001 (-) |
| G2243801 | NA | other | downstream | 1439997 | 2936604 ~ 2937542 (-) |
| G2243777 | NA | other | downstream | 1490080 | 2885291 ~ 2887459 (-) |
| si:ch211-274f20.2 | LOC106612323 | other | downstream | 1792353 | 2575623 ~ 2585197 (-) |
| G2245152 | ctnna1 | other | upstream | 158020 | 4535841 ~ 4621990 (-) |
| G2246314 | NA | other | upstream | 1470298 | 5848119 ~ 5852599 (-) |
| G2247416 | NA | other | upstream | 2492766 | 6870587 ~ 6871100 (-) |
| G2247565 | NA | other | upstream | 2560802 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 2877523 | 7255344 ~ 7255940 (-) |
