G2245487


Basic Information

Item Value
gene id G2245487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 4956977 ~ 4960423 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2567807
GTCTAGACTACCAGTACTATACTGctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactttactcctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactatactgctcctcctctaaactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctcctttatactgtctagactaccagtactatactgctcctcctctaaactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactatactgctcctcctctaaactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactgtactcctcctctatactgtctagactaccagtactatactgctcctcctctaaactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctcctctaaactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactgtactcctcctctatactgtctagaCTACCAGTACTTTACTGCTCCTCCTCTAAACTGTCTAGACTACCAGTACTATACtgctcctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactatactgctcctcctctaaactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactgtactcctcctctatactgtctagaCTACCAGTACTTTACTGCTCCTCCTCTAAACTGTCTAGACTACCAGTACTATACTGctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactgtactcctcctctatactgtctagactaccagtactgtactcctcctctatactgtctagaCTACCAGTACTATACTGCTCCTCCTCTAAACTGTCTAGACTACCAGTACTATACTGCTCCTCCTCTATATTGTATAGACTACCAGTACTATACTGctcctctatactgtctagaccaccagtactatactgctcctcctctatactgtctagactaccagtactgctcctcctctatactgtctagactaccagtactgctcctcctctatactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactatactgctcctctatactgtctagactaccagtactgtactcctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagactaccagtactgtactgctcctctatactgtctagactaccagtactatactgctcctcctctatactgtctagaCTGTCAGTACTATACTGCTCCTCCTCTATAATGTCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106511805

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2567807 True 1884 lncRNA 0.43 5 4956977 4960423

Neighbor

gene id symbol gene type direction distance location
LOC118945992 NA coding downstream 168657 4787439 ~ 4788320 (-)
LOC110504469 LOC106612313 coding downstream 362672 4589433 ~ 4594305 (-)
LOC110513918 syub coding downstream 666486 4236169 ~ 4290491 (-)
LOC110504518 LOC106612310 coding downstream 757034 4130654 ~ 4199943 (-)
higd2a LOC106612309 coding downstream 856261 4098767 ~ 4100716 (-)
LOC110504358 LOC106604155 coding upstream 528306 5488729 ~ 5526792 (-)
LOC110504491 LOC106604157 coding upstream 572436 5532859 ~ 5604780 (-)
LOC110504359 LOC106612272 coding upstream 746995 5707418 ~ 5731006 (-)
LOC118946011 NA coding upstream 778871 5739294 ~ 5740052 (-)
LOC110504499 LOC106604166 coding upstream 1155691 6116114 ~ 6422429 (-)
G2245376 NA non-coding downstream 93003 4863720 ~ 4863974 (-)
G2245358 NA non-coding downstream 110881 4844189 ~ 4846096 (-)
G2245352 NA non-coding downstream 115866 4840742 ~ 4841111 (-)
G2245270 NA non-coding downstream 223639 4733066 ~ 4733338 (-)
G2245265 NA non-coding downstream 227270 4729352 ~ 4729707 (-)
G2245500 NA non-coding upstream 25854 4986277 ~ 4986786 (-)
G2245503 NA non-coding upstream 32861 4993284 ~ 4993547 (-)
G2245518 NA non-coding upstream 59681 5020104 ~ 5020427 (-)
G2245523 NA non-coding upstream 63908 5024331 ~ 5024545 (-)
G2245536 NA non-coding upstream 77738 5038161 ~ 5038368 (-)
G2245152 ctnna1 other downstream 334987 4535841 ~ 4621990 (-)
G2244811 NA other downstream 843976 4111702 ~ 4113001 (-)
G2243801 NA other downstream 2019435 2936604 ~ 2937542 (-)
G2243777 NA other downstream 2069518 2885291 ~ 2887459 (-)
G2246314 NA other upstream 887696 5848119 ~ 5852599 (-)
G2247416 NA other upstream 1910164 6870587 ~ 6871100 (-)
G2247565 NA other upstream 1978200 6938623 ~ 7024539 (-)
G2247813 NA other upstream 2294921 7255344 ~ 7255940 (-)
G2248522 NA other upstream 3080453 8040876 ~ 8041480 (-)

Expression


Co-expression Network