Gene
RNA
| Item | Value |
|---|---|
| gene id | G2245500 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 4986277 ~ 4986786 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: desmoglein-2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2567823 | True | 465 | lncRNA | 0.39 | 2 | 4986277 | 4986786 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945992 | NA | coding | downstream | 197957 | 4787439 ~ 4788320 (-) |
| LOC110504469 | LOC106612313 | coding | downstream | 391972 | 4589433 ~ 4594305 (-) |
| LOC110513918 | syub | coding | downstream | 695786 | 4236169 ~ 4290491 (-) |
| LOC110504518 | LOC106612310 | coding | downstream | 786334 | 4130654 ~ 4199943 (-) |
| higd2a | LOC106612309 | coding | downstream | 885561 | 4098767 ~ 4100716 (-) |
| LOC110504358 | LOC106604155 | coding | upstream | 501943 | 5488729 ~ 5526792 (-) |
| LOC110504491 | LOC106604157 | coding | upstream | 546073 | 5532859 ~ 5604780 (-) |
| LOC110504359 | LOC106612272 | coding | upstream | 720632 | 5707418 ~ 5731006 (-) |
| LOC118946011 | NA | coding | upstream | 752508 | 5739294 ~ 5740052 (-) |
| LOC110504499 | LOC106604166 | coding | upstream | 1129328 | 6116114 ~ 6422429 (-) |
| G2245487 | NA | non-coding | downstream | 25854 | 4956977 ~ 4960423 (-) |
| G2245376 | NA | non-coding | downstream | 122303 | 4863720 ~ 4863974 (-) |
| G2245358 | NA | non-coding | downstream | 140181 | 4844189 ~ 4846096 (-) |
| G2245352 | NA | non-coding | downstream | 145166 | 4840742 ~ 4841111 (-) |
| G2245270 | NA | non-coding | downstream | 252939 | 4733066 ~ 4733338 (-) |
| G2245503 | NA | non-coding | upstream | 6498 | 4993284 ~ 4993547 (-) |
| G2245518 | NA | non-coding | upstream | 33318 | 5020104 ~ 5020427 (-) |
| G2245523 | NA | non-coding | upstream | 37545 | 5024331 ~ 5024545 (-) |
| G2245536 | NA | non-coding | upstream | 51375 | 5038161 ~ 5038368 (-) |
| G2245537 | NA | non-coding | upstream | 53251 | 5040037 ~ 5040330 (-) |
| G2245152 | ctnna1 | other | downstream | 364287 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 873276 | 4111702 ~ 4113001 (-) |
| G2243801 | NA | other | downstream | 2048735 | 2936604 ~ 2937542 (-) |
| G2243777 | NA | other | downstream | 2098818 | 2885291 ~ 2887459 (-) |
| G2246314 | NA | other | upstream | 861333 | 5848119 ~ 5852599 (-) |
| G2247416 | NA | other | upstream | 1883801 | 6870587 ~ 6871100 (-) |
| G2247565 | NA | other | upstream | 1951837 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 2268558 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 3054090 | 8040876 ~ 8041480 (-) |
