Gene
RNA
| Item | Value |
|---|---|
| gene id | G2245586 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 5082835 ~ 5083411 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: voltage-dependent L-type calcium channel subunit beta-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2567915 | True | 522 | lncRNA | 0.35 | 2 | 5082835 | 5083411 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945992 | NA | coding | downstream | 294515 | 4787439 ~ 4788320 (-) |
| LOC110504469 | LOC106612313 | coding | downstream | 488530 | 4589433 ~ 4594305 (-) |
| LOC110513918 | syub | coding | downstream | 792344 | 4236169 ~ 4290491 (-) |
| LOC110504518 | LOC106612310 | coding | downstream | 882892 | 4130654 ~ 4199943 (-) |
| higd2a | LOC106612309 | coding | downstream | 982119 | 4098767 ~ 4100716 (-) |
| LOC110504358 | LOC106604155 | coding | upstream | 405318 | 5488729 ~ 5526792 (-) |
| LOC110504491 | LOC106604157 | coding | upstream | 449448 | 5532859 ~ 5604780 (-) |
| LOC110504359 | LOC106612272 | coding | upstream | 624007 | 5707418 ~ 5731006 (-) |
| LOC118946011 | NA | coding | upstream | 655883 | 5739294 ~ 5740052 (-) |
| LOC110504499 | LOC106604166 | coding | upstream | 1032703 | 6116114 ~ 6422429 (-) |
| G2245583 | NA | non-coding | downstream | 739 | 5081640 ~ 5082096 (-) |
| G2245563 | NA | non-coding | downstream | 16670 | 5065798 ~ 5066165 (-) |
| G2245537 | NA | non-coding | downstream | 42505 | 5040037 ~ 5040330 (-) |
| G2245536 | NA | non-coding | downstream | 44467 | 5038161 ~ 5038368 (-) |
| G2245523 | NA | non-coding | downstream | 58290 | 5024331 ~ 5024545 (-) |
| G2245657 | NA | non-coding | upstream | 54925 | 5138336 ~ 5139186 (-) |
| G2245670 | NA | non-coding | upstream | 80463 | 5163874 ~ 5164089 (-) |
| G2245681 | NA | non-coding | upstream | 86263 | 5169674 ~ 5169894 (-) |
| G2245696 | NA | non-coding | upstream | 102325 | 5185736 ~ 5186015 (-) |
| G2245707 | NA | non-coding | upstream | 118100 | 5201511 ~ 5201769 (-) |
| G2245152 | ctnna1 | other | downstream | 460845 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 969834 | 4111702 ~ 4113001 (-) |
| G2243801 | NA | other | downstream | 2145293 | 2936604 ~ 2937542 (-) |
| G2243777 | NA | other | downstream | 2195376 | 2885291 ~ 2887459 (-) |
| G2246314 | NA | other | upstream | 764708 | 5848119 ~ 5852599 (-) |
| G2247416 | NA | other | upstream | 1787176 | 6870587 ~ 6871100 (-) |
| G2247565 | NA | other | upstream | 1855212 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 2171933 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 2957465 | 8040876 ~ 8041480 (-) |
